Conserved Protein Domain Family
PRK12517

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PRK12517: PRK12517 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 183569
Aligned: 41 rows
Threshold Bit Score: 271.175
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
113969742   1 MFANWRKKSVEPAVSSDMLSKQRRYNSLVKALHADIFRYAFWLCGDKQVAEDITQETFLRAWRSLDSLQDDKAAKAWLIT 80 
218708863   7 IIKMFGKKTAKRPVNSDM-DKQRKYEALVRAYHRDLFRYAYWLCKDKSIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 85 
262393627   1 ------------------MDKQRKYEALVRGYHRDLYRYAYWLCKDKAIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 62 
227081218   4 ILNLFGKKVSQRPVNNDM-DRQRKYEALVRAYHRDLYRYAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLIT 82 
156975391  13 IFKMFGKKNSNSPVNSDM-DRQRKYEALVRGYHRDLYRYAYWLCKDKAIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 91 
28898984    7 ILKMFGKKNSNSPVNSDM-DKQRKYEALVRGYHRDLYRYAYWLCKDKAIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 85 
37680626    7 IFELFRKKTSDTPVNTEM-DRQRKYEALVRAYHRDLYRYAYWLCKDQSIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 85 
27365319    7 IFELFRKKTSDTPVNTEM-DRQRKYEALVRAYHRDLYRYAYWLCKDQSIAEDLVQETCLRAWKSLDSLQDEKAAKSWLIT 85 
15641058    4 ILNLFGKKVSQRPVNNDM-DRQRKYEALVRAYHRDLYRYAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLIT 82 
77359905    1 ---MFGNKKSNNQVLIDMAQKQKRYEALVHVYHKELYRFAYWLCRDPHIADDLVQETFLRAWRSLDSLLDQKAAKSWLLT 77 
113969742  81 ILRRENARRFERKQFDYADIEQDSLEDHIASSTEEQTEQYWLRRQIAKLDIEYREPLLLQLIGGFSGDEIAQLLDLNRNT 160
218708863  86 ILRRENARRFERKQFDLVDIDDH--GNDASISDDPHHQHQWLQAQIMKLEIEYREPLFLQVIGGFSGDEIADILDLNKNT 163
262393627  63 ILRRENARRFERKQFDLVDIDDY--GNDAKVSDDPHHQQEWLQAQIMKLDVEYREPLFLQVVGGFSGEEIGDILDLNKNT 140
227081218  83 ILRRENARRFERKQFDLVDIDDH--DYEAKYSDDEHHQNEWLQRQILKLDVEYREPLFLQVVGGFSGEEIADILSLNKNT 160
156975391  92 ILRRENARRFERKQFDLVDIDDY--GNDAKVSDDPHHQQEWLQAQIMKLDVEYREPLFLQVVGGFSGEEIGSILDLNKNT 169
28898984   86 ILRRENARRFERKQFDLVDIDDY--GNDAKVSDDPHHQQEWLQAQIMRLDVEYREPLFLQVIGGFSGEEIGDILDLNKNT 163
37680626   86 ILRRENARRFERKQFDLVDIDDY--GNDAKVTDDEHHQQEWLQAQIMKLDVEYREPLFLQVVGGFSGEEIGDILDLNKNT 163
27365319   86 ILRRENARRFERKQFDLVDIDDY--GNDAKVTDDEHHQQEWLQAQIMKLDVEYREPLFLQVVGGFSGEEIGDILDLNKNT 163
15641058   83 ILRRENARRFERKQFDLVDIDDH--DYEAKYSDDEHHQNEWLQRQILKLDVEYRELLFLQVVGGFSGEEIADILSLNKNT 160
77359905   78 ILRRENARRFERKQFDYSDIEDELLVDESSHSLDDEMEQTVIQRQIALLPDEYKEPLLLQVVMGCSGEEIANILDLNKNT 157
113969742 161 VMTRLFRARNQLKELLEKTDV-RGQSNG 187
218708863 164 VMTRLFRARNQLKEMLDTEEAeRGQHNG 191
262393627 141 VMTRLFRARNQLKEMLDSQDTkRGQKNG 168
227081218 161 VMTRLFRARNQLKEMMDGSEHyPEQQNG 188
156975391 170 VMTRLFRARNKLKEMLDSQDTqRGQKNG 197
28898984  164 VMTRLFRARNQLKEMLDSQDTkRGQKNG 191
37680626  164 VMTRLFRARNQLKELLDSDQTqRGQKNG 191
27365319  164 VMTRLFRARNQLKELLDSDQTqRGQKNG 191
15641058  161 VMTRLFRARNQLKEMMDGSEHyPEQQNG 188
77359905  158 VMTRLYRARNQLKEALSRDDEqLKGASK 185
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