Conserved Protein Domain Family
Polysacc_synt

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pfam01943: Polysacc_synt 
Polysaccharide biosynthesis protein
Members of this family are integral membrane proteins. Many members of the family are implicated in production of polysaccharide. The family includes RfbX part of the O antigen biosynthesis operon. The family includes SpoVB from Bacillus subtilis, which is involved in spore cortex biosynthesis.
Statistics
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PSSM-Id: 426523
Aligned: 17 rows
Threshold Bit Score: 136.278
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O34674   5 LLRGTFVLTLGTYISRILGMVYLIPFSIMVGATGGALFQYGYNQYTLFLNIATMGFPAAVSKFVSKYNSKg-----dYET 79  Bacillus subtilis sub...
O29660   6 VLKNVIYNSSSVLIGNLAGLVISIYVARVLKPELFGIYSLAISVAFLLMTFTDLGINATLVRYVAHANIKgddelvrGYI 85  Archaeoglobus fulgidus
Q58467   7 AVKGVSWHLLSYFLAAPIAYLVRVLYANEIPKLDVGLFYAVLDFFSMLVVFRAFGLDQALIRYIPKYLAEnrldmlkSSI 86  Methanocaldococcus ja...
P33699  10 VTRNVGWSVLSKTGTFGLKFVTVPILARILSPEEFGAVAVALTVVQFLAMIGGAGLTSALVIQQHEEMET---------V 80  Sinorhizobium melilot...
Q8P805  22 aagGAAVTMIGQSAKMIVQFGGIVLLARLLTPYDYGLMAMVTAIVGAAEILRDFGLSAAAVQAKHVSRE---------QR 92  Xanthomonas campestri...
O32273  10 SGAKWTSISTMCITI--IQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATER---------QL 78  Bacillus subtilis sub...
P77377   9 SGAKWSAIATVIIIG--LGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFGIANSIIQRKEISHL---------EL 77  Escherichia coli K-12
Q58770   3 LCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPPAIAKFLAEEKE---------VD 73  Methanocaldococcus ja...
P37555  12 IWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQQVYPFLGIAVMLSTSGFPVIISKLMNDYSEK--------NH 83  Bacillus subtilis sub...
Q00758   6 FLKGTLILIAAGMVTRMLGFVNRVVIARFIGEEGVGLYMMAAPTFFLATTLTQFGLPVAISKLVAEASARg-----dHQK 80  Bacillus subtilis sub...
O34674  80 SRKMLKAGMSVMLVTGMIAFFILYLSApmfaeislggkdNNGLTIDHVVYVIRMVSLAl-lVVPIMSLVRGFFQGHQMMG 158 Bacillus subtilis sub...
O29660  86 RSLTKLKALLVLAVASMLFLGSDFIAEq-----------FFSKPELSLPLRIMALYIT---FFSMAGFINGIFNAFNDFK 151 Archaeoglobus fulgidus
Q58467  87 VFVGILQTILAFIVAFLVVIFAPYIAEfyin----nqgqFTGRLDLVINILIIMAMGYy-fLDSIVAFFSNILTGFQLQN 161 Methanocaldococcus ja...
P33699  81 HSVFWANLAIALMMALGLFVFAEPLAT------------LLGAPEAAYLLRIMSLLIPl--QLGGDVAYSLLVRRMNFRK 146 Sinorhizobium melilot...
Q8P805  93 DNLFWINSGIGLMLSVVVFATAHWIAD------------FYHEPALVTISQALAVTFLl--NGMTTQYRAHLSRGLRFGQ 158 Xanthomonas campestri...
O32273  79 STLYWLNIMTGVLLFVLLYVSSPVIAG------------FYQREELVFLVRILAIMFLi--APIGQQYQYMLQKQLHFNT 144 Bacillus subtilis sub...
P77377  78 TTLYWLNVGLGIVVCVAVFLLSDLIGD------------VLNNPDLAPLIKTLSLAFVv--IPHGQQFRALMQKELEFNK 143 Escherichia coli K-12
Q58770  74 INKYIPILYLMILLSVVGFILTPYIKY------------ILGGHYLNLPNILYFAVGLcvvASTVIAFSRGILQGLLKMK 141 Methanocaldococcus ja...
P37555  84 HTILKISALFLSLIGILLFLCLYLGAVpi--------alFMGDSHLAVLIQVAAYAFLl--FPFVALLRGGFQGRHEMLP 153 Bacillus subtilis sub...
Q00758  81 TKNILVMSLTITGVLSLIFTPLFLFFApv--------maETMLTDKRTLYPLLAITPVv-pIIAISSVLRGYFQGKQNMN 151 Bacillus subtilis sub...
O34674 159 PTAVSQVVEQIVRIIFLLSATFLILKvfnggLVIAVGYATFAALIGAFGGLVVLYIYWnkRkgsllammpntGPTANLSy 238 Bacillus subtilis sub...
O29660 152 ANFVRALVYEISRATLIFLLLYLGLS-----VAGALLGYVGASLLSLIALLAMLFRKL--Rn----------FLFGKAK- 213 Archaeoglobus fulgidus
Q58467 162 YASSTRVVRILSVFIFSLIFIYLFNVhn--aYVPSVSYLLMAVVMIIIYGYIVVKKIFpkFa----------KEKVIFS- 228 Methanocaldococcus ja...
P33699 147 DAVWSMISESLGAVIAVLLALLGFG------IWSLLAQLFVSALVRLSGLYAVSR--Y--A-----------PRFVFS-- 203 Sinorhizobium melilot...
Q8P805 159 VALSDVGSQVLGLGAAVAAALAGWG------YWALIVQQVVQAIVNLIIAGACAR--W--L-----------PRGYAR-- 215 Xanthomonas campestri...
O32273 145 LSKIEIFSNVLSFG-YLAIAVFMMDA-----ILAYVISQVLLQSSKGILYWAVYRKKW--H-----------PAFVFD-- 203 Bacillus subtilis sub...
P77377 144 IGMIETSAVLAGFTCTVVSAHFWPLA-----MTAILGYLVNSAVRT-LLFGYFGRKIY--R-----------PGLHFS-- 202 Escherichia coli K-12
Q58770 142 YLSLTWIVEYTAKVILVFILTLYLG------IFGSLLSISLAYLVGGIFGLYLIYKALk-Gk----------FDFKKLId 204 Methanocaldococcus ja...
P37555 154 SALSQMTEQFLRVAVLLGLSFWLVKKga--sLYTAGAAAASGSLAGSLVALIILGFFWfkTkrdn---qtdrQNENVITt 228 Bacillus subtilis sub...
Q00758 152 PLAMSQVLEQVVRISLVAVCTTIFLPy---gIEYAAAGAMLSSVAGELASLLYLFVCFkyKktik---irkhFLQSIKNg 225 Bacillus subtilis sub...
O34674 239 KKMFFELFSYAAPYVFVGLAIPLYNYIDTNtFNKAMIEAGHqais-qdmLAILTLYVQKLVMIPVSLATAFGltLIPTIT 317 Bacillus subtilis sub...
O29660 214 RVDWRRIVRFTGYLTVGSITWTVFAYVDSV-MIGAMLPSED--------VGFYRAAYNIVGAVSGIVALPGV--LFPVFV 282 Archaeoglobus fulgidus
Q58467 229 RKLIRNLFSYGMYVMIGYAGSLILGYLDGI-CLTYFTGLNA--------VADYRNVAMPTVNILSYFAFSVGavLFPMSS 299 Methanocaldococcus ja...
P33699 204 LQRVLALSRFSFGMMGSEIANFITFQSPMV-VISRYLGLSD--------AGAYSAANRFASIPNQVVLSAVMgvLFPTFG 274 Sinorhizobium melilot...
Q8P805 216 QAPMRDFMSFGWNLMAAQLLGYASRNVGQV-IIGWRTGPDA--------LGLYNRAFQLLMMPLNQINAPATsvALPVLS 286 Xanthomonas campestri...
O32273 204 LRGMKDFFSFGAFQLSSRLVNRLGANIDMI-LIGRFIGAEA--------LGIYNLAYQIVTIPVLKINPIVTrvAFPIFA 274 Bacillus subtilis sub...
P77377 203 LASVAPNLRFGAWLTADSIINYLNTNLSTL-VLARILGAGV--------AGGYNLAYNVAVVPPMKLNPIITrvLFPAFA 273 Escherichia coli K-12
Q58770 205 IKNTTKNIFSNFNLDILRYSIPIALTSSSYrLFGDIDNIVIms----imGGFWSGIYGYSSLISRGIFMFASavSIPLLP 280 Methanocaldococcus ja...
P37555 229 KELTKKLLLYSVTICVSSLLLLFIQLVDALnLYALLSGGEAseea-kclKGIYDRGQPLLQLGSVFAVSIATs-LVPYIS 306 Bacillus subtilis sub...
Q00758 226 KQTFTQLMSVSLPTTGSRFIGNLSWFFEPIvVAQSLAIAGVatvaatkqYGELTGFAMTLLTLPSFITYSLStaLVPAIS 305 Bacillus subtilis sub...
O34674 318 ESF 320 Bacillus subtilis subsp. subtilis str. 168
O29660 283 QLE 285 Archaeoglobus fulgidus
Q58467 300 ELW 302 Methanocaldococcus jannaschii DSM 2661
P33699 275 QMM 277 Sinorhizobium meliloti 1021
Q8P805 287 QLQ 289 Xanthomonas campestris pv. campestris
O32273 275 KNK 277 Bacillus subtilis subsp. subtilis str. 168
P77377 274 KIQ 276 Escherichia coli K-12
Q58770 281 RIS 283 Methanocaldococcus jannaschii DSM 2661
P37555 307 MAV 309 Bacillus subtilis subsp. subtilis str. 168
Q00758 306 EGM 308 Bacillus subtilis subsp. subtilis str. 168
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