Conserved Protein Domain Family
MFS_YcxA_like

?
cd17355: MFS_YcxA_like 
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters
This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
?
PSSM-Id: 340913
Aligned: 34 rows
Threshold Bit Score: 171.685
Created: 26-Oct-2016
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                   ##  ##  #                                   #                        
Q08791         8 KWFVLLFTFVFAIGMNSFRNSFQFFMLPMada-fhADRSLISVSVSIFMITTGIVQFFVGFFIDRfsVRKIMALGAVCIS 86  Bacillus subtil...
Q9I0P8        12 GVLLASVVAIMLGPTGILLNTFSLFIAPMsae-yaWDRAEVSLLVTLFGLAVAITSPLKGWLIDRwgARRTMLGLTAALS 90  Pseudomonas aer...
Q9X4X9        20 KILILSVAGVAISINAALLYGFGTLVVPLnqa-fgWTRPELQACITFLFGGAVISLQLVGWFNLRygIKRVTVISLLLLV 98  Pseudomonas abi...
NP_250781     28 GVLLASVVGVIFGPTGLVISSFSLFIEPIaad-ldWDRGQSALPVTLLGLAVALSSPLKGWLVDRwgARALVLPLTAALA 106 Pseudomonas aer...
NP_630881     19 PRAALPALCLTQITSWGIVYYAFPVLNPQitmatgWSATATTAAFSAALLMSAVAGIRIGRILDArgPRTVMTVGSVVGT 98  Streptomyces co...
YP_885561     12 LRWVLITLCVTEITSWGVLYYAFTVLSASissdtgWSAPAVTGAFSAGLVTSALMGIVVGRWLDRygPRWIMTIGSVLGV 91  Mycobacterium s...
YP_001637158  14 GWIMLLTVSITEVISWGILYYAYSVFILPmsrdlaVDQLVVATGYAVALLTNGLAAPLVGWWLDRagSRWLMTAGSSLGC 93  Chloroflexus au...
NP_769729     29 WIVLGAGTFGSFMTLPGQTAGVSVFFDPItad-lgISRTSASIAYAVGTLAGILPAPVIGRWIDRrgPRLAATIIACGLA 107 Bradyrhizobium ...
YP_888427     22 WAALTAVTVGIAIGVGVLPTYVNGLVIPEleaefgWSRTALSALPLIGSLIIIATAPVVGVVVDRfgVRIPAVSSLVAFA 101 Mycobacterium s...
YP_889703      5 SPAPLVGLCVFEFLSWGILYYTLPVIGVRitaatgWPPLVVPVVYTTSLLCAAFATPWAGRMVDRhgPRPVMTLGSLVGA 84  Mycobacterium s...
Feature 1                               ## ###  #                       #  ##  #                 
Q08791        87 ASFLVLPYs-PNVHVFSAIYGVLGGIGYSCAVGVTTQYFiscwfdtHKGLALAILTNANSAGLLLLSPIWAAApyHAGWQ 165 Bacillus subtil...
Q9I0P8        91 LPLLGLAAv-NAVWQLYALFLLIGLLAPGNLPYGRILGLwf---rqRLGVAYGLLGLGFGVGGPLGLLVGHQSleAWGWR 166 Pseudomonas aer...
Q9X4X9        99 LGYLATTQltHSIWSMYLAFALLPIVGMGTLAVTWTQLLslw-yerNRGLALAIGLSGTGLTAAIVPRLMSWGieQWDWR 177 Pseudomonas abi...
NP_250781    107 LCLASLALa-RSGWQLYLLFALLGLLTPGNIPYARILGGwf---erRRGAAYGILGLGFGVGGPLALYLGSACidAFGWR 182 Pseudomonas aer...
NP_630881     99 VSLVIIASa-PNLTVFTAGWLLAGFAMASTFYQPAFAALtrw-wapNHVRALTIVTLAGGLASTVFAPLTAQLanHFSWR 176 Streptomyces co...
YP_885561     92 VAVLAVVVa-PNYACFVAAWILAGVAMSGVFYAPAFAALtry-fapNAVRALTVLTLVAGLSSTVFAPLTAALgsHLSWR 169 Mycobacterium s...
YP_001637158  94 GLLVVWSQi-TTPGQLYLVMAGIGLASAAVLYEPAFAIVatw-frrERGRALQILTFFGAWASFVFIPLSGWLvdWLGWR 171 Chloroflexus au...
NP_769729    108 LACALMAMv-QSAVMLLIGFAVLRGAAIGGLSLVSQQVVnlw-fvrRRGIAAAAASLGLAAGSMTFPKLIDSLisLYGWR 185 Bradyrhizobium ...
YP_888427    102 AGYFLLAYs-NSSFGQYLLMFIVMYLLAAASTAVAFTRTinerydrARGLALGIALSGAGVVGFLVPSVVGPVi-ADNWR 179 Mycobacterium s...
YP_889703     85 GALVLAGVt-GWLPLFAVAWLVVGVAQAGTLYPPAFAAAtqw-fgtVRAWPLTAITLAGGVSSTAFAPLTAALneKLGWQ 162 Mycobacterium s...
Feature 1                                                                        #  ##  ###  #   
Q08791       166 STYTILGIVMAAVLLPLLVFGMKhpphaqaet---------vkksydwrgFWNVMKQSRLIHILYFGVFTCGFTMGIIDA 236 Bacillus subtil...
Q9I0P8       167 GAFLVYGVLELGLALPLLAWLFRepapdagvaag-----tavaetalsgsTAPQAWRSASFWLVLGNQVLAVFVMSGIMT 241 Pseudomonas aer...
Q9X4X9       178 AAFVMLAILNLVVLLPLTLLWFRlpgvevkrselae-kaadhllltlpgvSFREGMRSGKFWICNLALSLVVSSVVGMVT 256 Pseudomonas abi...
NP_250781    183 ATFLVYGLLEGLLALPLLYALFRerpgdlpqar-------rtpadalpgaTPGQAWRSADFWLIVGNLILGVFAVTGVMV 255 Pseudomonas aer...
NP_630881    177 HTYLLLALVLATVTVPVHAYALRgpwppapp-----------psttgetaSTTVITRSRPFLLLATALTLSAFATYAVVI 245 Streptomyces co...
YP_885561    170 QTYLVLAALLAVITIPAHLFGLRrpwppvq--------------hhhnveAPTRTARSAPFLALMVSFALAALASYAVIV 235 Mycobacterium s...
YP_001637158 172 SALIVLALILSLTIPPHALILRRrpadlglepdgvs-qnphlnhppepslQWRAVVARSRFWLISLAFAISSFATVAMTV 250 Chloroflexus au...
NP_769729    186 GAYLALAGLVALTIVPVAAALFRdrpekyglstdaglppttqdlreessfTRKQALRTGVFWLLCAAGFLTNAIGTALLL 265 Bradyrhizobium ...
YP_888427    180 TGYRILAVVILLCAVVVAALMPRrtaktaaal----------prhpggrgLVLELIRQPRFWRLAIAFLTLALAVGGMLQ 249 Mycobacterium s...
YP_889703    163 TTLVVLGTGYGVVSTAAAALMLTsrwrrpvr------------egaehaeYVTQIVRSAPFRRSRLALAMTALGLYAVTL 230 Mycobacterium s...
Feature 1                                  #   #                                                 
Q08791       237 Hlvpilk--dahvshVNGMMAAFGAFIIIGGLLAGWLSDllgSRSVMLSILFFIRLLSLICLLIPILgihhsdlwYFGFI 314 Bacillus subtil...
Q9I0P8       242 HgvpmlverglsrgeAGTALSALWVGMMLSQPLMGWLLDr-vATPRVALPFALAAVLGMAWFLVGDTps-----gLWLAV 315 Pseudomonas aer...
Q9X4X9       257 StipllqskglsaadAGLIFSGFGISLIVGRMLIGYLLDr-lWPPAVAAASLMMPAVGCMIYLSGTTdf----qmLLMAA 331 Pseudomonas abi...
NP_250781    256 HgvpllqerglsrevATDVLAALWVGMIVSQPALGYLLDr-yDTPRIALPFALLAALGLLLLLLGGPpa-----lLWGAV 329 Pseudomonas aer...
NP_630881    246 TlvpllldrgytaaeAAWALGLGGAGQTLGRTLYAPLARr-sSPALRAAVLIGMGGVTTAAFALIPGpy-----gLLAAL 319 Streptomyces co...
YP_885561    236 NlvplmvqrgfstsaAAVALGLGGAGQVLGRLGYQTMARr-iGVVPRTVLIMAAVAVTTALLGVFTTl------aALVAA 308 Mycobacterium s...
YP_001637158 251 HlipylisrgeqltfASAMAGLHGLMSLLGRLLIGPLGEr-wPRWLVTGGLFGLQMIGLAILTLSTHpi-----aVLVYV 324 Chloroflexus au...
NP_769729    266 NhfsimrtagiahsdALLLLSLLAGVQAVATLGTGFLVDr-yEPRHLVPIAMFMLALATALPAFSSGva-----iSVLYA 339 Bradyrhizobium ...
YP_888427    250 HlfpmlrdagvsaaaAARTASLVGVAVIIARIVVGLLVDr-fFAPRVAALVLVVSAAGYVALLAGGPa------fAAFAG 322 Mycobacterium s...
YP_889703    231 NviplltelgfgyhsAAIVFGLIGVGQVFGRVLYLPLRRl-gTPRARTTAQVAASTAGMGILAVVTApl-----aLAASA 304 Mycobacterium s...
Feature 1             ##   #   #                #  ##  ##  #                                     
Q08791       315 LLFGLSYTGVIPLTAASIse-syQTGLIGSLLGINFFIHQVAGALSVYAGGLFfd-mTHGYLLIVAVCIVFVGLSAVIEL 392 Bacillus subtil...
Q9I0P8       316 FLVGLGGGGESGTTKYLLmryfgLRSFGVIYGSIQPFTFALSISLGAYLLGWLydraEGYGTAEWVLLAAFSLAACSLFA 395 Pseudomonas aer...
Q9X4X9       332 MLVGFGAGAEFDIAAFLVar-yfGLREYGRLFGVHQGLNTVASALAPLLFAFMls-rSGDYSAMLVYCMACCLIGPLLLL 409 Pseudomonas abi...
NP_250781    330 FLIGLGAGGETGTTQYFVsryfgLRHFSVIYGSIQPFTFAIAISLGSWLLGYFyd-rAGSYAGSTLVLLGAFGVAAGLLV 408 Pseudomonas aer...
NP_630881    320 AVIAGTVRGNLTLLQATAitdrwGAHRYGRLSGLLAAPTTTASALAPFAGTALaa-pLGGYPRLFSALALASAAAALIAW 398 Streptomyces co...
YP_885561    309 SIVAGMARGIMTLLQATAvtdrwGTTHYGHLSGMLMAPIMITTALGPFVGAALas-lLDGYDAMFLVLGVVAAVAAALAA 387 Mycobacterium s...
YP_001637158 325 ALFGAGAGTQTIMRAALIae-qyGVANYGVISGLQNALLTVARTVAPVGAGVLvg-wIGYDGMAWCLIGLLGLGVLALVG 402 Chloroflexus au...
NP_769729    340 LSLGGAYGSQQAINAAGYaq-yfGRDHLGAIRGASFVFGIAGAAFGPLPFAASvd-wAGSYAAVLIGCCMLCIICGAGAF 417 Bradyrhizobium ...
YP_888427    323 IGVGLASGAEVDIIGNLTsr-yyAIESYGRVFGIFYATFFLGFGSSPLLVAWLrs-lTSDYTLPILMSVALMLVAAALLF 400 Mycobacterium s...
YP_889703    305 AMFAGAARGTHTLSVANAvtdrwGAESYATILGRFHRPVAIAMALGPATGSAIaa-aLGSYRTAAALFAVLGGLAILTAR 383 Mycobacterium s...
Feature 1          
Q08791       393 VP 394 Bacillus subtilis subsp. subtilis str. 168
Q9I0P8       396 FR 397 Pseudomonas aeruginosa
Q9X4X9       410 ML 411 Pseudomonas abietaniphila
NP_250781    409 ML 410 Pseudomonas aeruginosa PAO1
NP_630881    399 YT 400 Streptomyces coelicolor A3(2)
YP_885561    388 AT 389 Mycobacterium smegmatis str. MC2 155
YP_001637158 403 SG 404 Chloroflexus aurantiacus J-10-fl
NP_769729    418 AV 419 Bradyrhizobium diazoefficiens USDA 110
YP_888427    401 TA 402 Mycobacterium smegmatis str. MC2 155
YP_889703    384 RS 385 Mycobacterium smegmatis str. MC2 155

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap