5LWK,5LWL


Conserved Protein Domain Family
REC_citrate_TCS

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cd19925: REC_citrate_TCS 
Click on image for an interactive view with Cn3D
phosphoacceptor receiver (REC) domain of citrate family two-component system response regulators
This family includes Lactobacillus paracasei MaeR, Escherichia coli DcuR and DpiA, Klebsiella pneumoniae CitB, as well as Bacillus DctR, MalR, and CitT. These are all response regulators of two-component systems (TCSs) from the citrate family, and are involved in the transcriptional regulation of genes associated with L-malate catabolism (MaeRK), citrate-specific fermentation (DpiAB, CitAB), plasmid inheritance (DpiAB), anaerobic fumarate respiratory system (DcuRS), and malate transport/utilization (MalKR). REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.
Statistics
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PSSM-Id: 381152
Aligned: 15 rows
Threshold Bit Score: 143.154
Created: 22-May-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[ED] [ED] [ED]Click to see conserved feature residue pattern help
Evidence:
  • Structure:5LWK: Lactobacillus paracasei MaeR REC domain binds Mg2+
  • Comment:also based on metal binding site of other family members
  • Comment:signal transduction in two-component systems is mediated by metal ion dependent phosphorelay reactions between protein histidine kinases and phosphoaccepting receiver domains in response regulator proteins
  • Comment:for many receivers, Mg2+ is the preferred metal ion, but other divalent ions such as Mn2+ are also used

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ##                                              #                         
5LWK_A      2 TNILIVEDDpmVQFIHRNYLEKIgTFDTIYSSETIADakkll--asrsIQLVLLDIRlkdgnGIDFLTDLRrtkqtVDVI 79  Lactobacillus para...
5LWL_A      3 TNILIVEDDpmVQFIHRNYLEKIgTFDTIYSSETIADakkll--asrsIQLVLLAIRlkdgnGIDFLTDLRrtkqtVDVI 80  Lactobacillus para...
Q9K998      7 IRVLLIEDDpmVQEVNRMFVEKLsGFTIVGTTATGEEgmvkt--relqPDLILLDIFmpkqdGLSFIKQIReqyidVDII 84  Bacillus haloduran...
P96602      6 WKVLLIEDDpmVQEVNKDFITTVkGVTVCATAGNGEEgmkli--keeqPDLVILDVYmpkkdGIKTLQEIRkqkleVDVI 83  Bacillus subtilis ...
Q9RC52      5 YKVLIIEDDfrVAQIQEQMVNDHpYFHVISTCRTGGEaldylsekaaaLDLILLDVYipdvkGLELLWAIRekfrdVDIM 84  Bacillus haloduran...
O34534      2 IHIAIAEDDfrVAQIHERLIKQLdGFKIIGKAANAKEtlall--kehkADLLLLDIYmpdelGTALIPDIRsrfpeVDIM 79  Bacillus subtilis ...
P52688      4 ITTLIVEDEpmLAEILVDNIKQFpQFDVIGIADKLESarkql--rlyqPQLILLDNFlpdgkGIDLIRHAVsthykGRII 81  Klebsiella pneumoniae
P0AD02      2 INVLIIDDDamVAELNRRYVAQIpGFQCCGTASTLEKakeiifnsdtpIDLILLDIYmqkenGLDLLPVLHnarckSDVI 81  Escherichia coli O...
O05251      2 INVLIVEDDpmVGELNKRYLSQIdGFQLKGIASSFQSalhil--gehhIDLILLDIYmpgknGLELLTELRaqneaVDVI 79  Bacillus subtilis ...
NP_625429  27 IGVLVVDDDfmVARVHRAFVERVePFRVLGVAGTGEQalaav--gelrPDLVLLDLYlpdvfGLDVIPRLRaaghdCDVM 104 Streptomyces coeli...
Feature 1                                             
5LWK_A     80 LITAANEvnIVNDALhLGVIDYLIKPFTLERFEKSIQRYR 119 Lactobacillus paracasei
5LWL_A     81 LITAANEvnIVNDALhLGVIDYLIKPFTLERFEKSIQRYR 120 Lactobacillus paracasei
Q9K998     85 AVTAANDtkTIKTLLrYGVMDYLVKPFTFERLKAALTQYE 124 Bacillus halodurans C-125
P96602     84 VVSAAKDkeTISLMLqNGAVDYILKPFKLERMRQALEKYK 123 Bacillus subtilis subsp. subtilis str. 168
Q9RC52     85 MVTAAKEvdTVQEALrGGIIDYLLKPVQKEVLHQRLDAYV 124 Bacillus halodurans C-125
O34534     80 IITAATEtrHLQEALrAGIAHYLIKPVTADKFRQVLLQYK 119 Bacillus subtilis subsp. subtilis str. 168
P52688     82 FITADNHmeTISEALrLGVFDYLIKPVHYQRLQHTLERFA 121 Klebsiella pneumoniae
P0AD02     82 VISSAADaaTIKDSLhYGVVDYLIKPFQASRFEEALTGWR 121 Escherichia coli O157:H7
O05251     80 VISAASEldVIKKTLrYGAVDYLIKPFEFERFQTALSDYR 119 Bacillus subtilis subsp. subtilis str. 168
NP_625429 105 VISAAREadAVRGAVrHGVVDYLLKPFEFEDLRVRLQRYA 144 Streptomyces coelicolor A3(2)

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