Conserved Protein Domain Family
SGBP_B_XBD

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pfam18329: SGBP_B_XBD 
Surface glycan-binding protein B xyloglucan binding domain
This is the C-terminal domain found in the surface glycan-binding protein-B (SGBP-B) protein found in Bacteroides ovatus. SGBP-B is a cell-surface-localized, xyloglucan-specific binding protein. The C-terminal domain mediates xyloglucan binding. The domain display similarity to the C-terminal beta-sandwich domain of many GH13 enzyme.
Statistics
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PSSM-Id: 465713
Aligned: 42 rows
Threshold Bit Score: 106.725
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_044161859  214 FNYSS-CMILNFDGKGTQGvw-sWSETgsmlgaadkkddngkytqrdERADDPAHS----GRgKCMQLIPDRMlnnadgg 287 Bacteroides re...
WP_052956006  204 FRDNR-NIVISSD--PFTGw---WNAsyv---------------vsaPGPDDPQLI----NG-NYIRVKKVIGd------ 251 Flavihumibacte...
jgi:Dfer_2531 206 FRDNR-NIFISSD--PFTGw---WNAsfvv--------------skpGPGDPS-AI----NG-NYIHVKKPIGg------ 253
Q5LH78        206 YMEKG-NMLCDFD--PFTG----WGGSky-----------------vIDGPVPAPY----SG-YFSRFKINKGda----- 251 Bacteroides fr...
EGJ99386      215 YMDNR-GLFQDID--HYQG----WTGQnwf--------------tdvSRPDDPKPC----SG-LYTRINRTLGp------ 262
CCX62477      213 YRDKE-CMIMDFD----------ESVPssma-------------nvvTDVNDKNRL----SG-NYLHIDDKSEw------ 257
EGK05722      212 YYDNE-CMIVDFD----------NRVPssmt-------------nvvTDPKDKNRL----SG-NYLHINEKSAw------ 256
CCY64153      227 YGDFS-GVSFNNDGTIVYS----------------------------IEGDDATSAeetsLGrQHLHFTGTFDa------ 271
WP_022276212  222 YRMTD-AIIWNLSHPDDYGl---WAGKeli--------------ineAGDNEPEIL----YG-PYFRVTGSYGa------ 272 Bacteroides
EFM00818      214 YRDKGvQFFAGYDKDYLFGkgylWTSQdyf--------------tdgTNEGDPVPP----IGkWFFRRKDTYSa------ 269
WP_044161859  288 iaatktrcteVWTAgtgnADDDWTWMy------------THIPATTPVTEVAFQFDIYVPEsnPWNnTGYIEVMLYNNVN 355 Bacteroides re...
WP_052956006  252 ---------wAWTE--------VAGGpadamgdisknipDEAIL--KPELYNLKFEVNTKK--PYD-KSMVRFNFGLAAQ 309 Flavihumibacte...
jgi:Dfer_2531 254 ---------wQWTE--------VAGGppdamgaisknipDSAIL--KPADYVLKFEVNTVK--PYN-NNVLKITAGLAAG 311
Q5LH78        252 ---------nDW---------DWNEVttiaqc--aveysPEVIA--DQNKYLLKFEVNTIK--PLT-KRQIRFYFSqi-- 304 Bacteroides fr...
EGJ99386      263 ---------wEWFD----FIASWYPVf------------DGTDCFDNPEKYDYKFEVLTLI--PLK-TKGIGLIFqt--- 311
CCX62477      258 ---------sSWW--------YIAEIsdv-------pftDDMLD--NYENYVIKCEFYTAN--QLI-DGKIKFCNYLFWD 308
EGK05722      257 ---------sSWW--------YIIEIgnt-------pltDDMLD--HSDQYVIKCEFYTAN--QFV-DGKIKFFNYLFWD 307
CCY64153      272 ---------wAWNTvd-lSCNMINSAd-----------lGDLSQAGSLDDYVLKFEVYTPNgtPLTqASPLQLSFNWgd- 329
WP_022276212  273 ---------wNWTN-------LVCGGf-----------nCPADVAAAPADYNFKFEVYSPTghPFYdSAGYGYLIQLNng 325 Bacteroides
EFM00818      270 ---------wNWDT-------LIAGHfd----------lDDADVVNHLENYCIKFEVWTAKdkPIP-TGDFIFWSQQSAD 322
WP_044161859  356 magigsddegqhvAFFVPWInngakTPYTTEGRWQTVTIPF-SEwaviakgiaEDGKIptfsdivDARLAKDYYNFGMGI 434 Bacteroides re...
WP_052956006  310 dn---------anYQWAP--------PIDTKGAWQTVTIPF-NEla-----ssYNAKL--------AVNPNGYWTRVLIQ 358 Flavihumibacte...
jgi:Dfer_2531 312 fnd--------sqYTWLP--------PYDTKGQWQTVTIPF-QEiaa---syeSAGSK-------LVVSEKGYYTRLLFH 364
Q5LH78        305 ------------nYDWEPFAs---gLALNTNGEWKTVSIDLgEM---------WKGDI----------PNDGVLQIMGNS 350 Bacteroides fr...
EGJ99386      312 ------------gYYWEPgk----iVEFNTNGKWKTITVPLeVV---------MNGMKe-----tNLPHENGHVGFQINI 361
CCX62477      309 aa----------pMEWNPTD-----FVVQNFNRWETITLPF------------VVNRSs------TYTDNSYYHSFNMRL 355
EGK05722      308 aa----------pMEWKPSD-----FVFQNFNRWETITLPF------------KRNYSd------TYKENMYYHSFNMRI 354
CCY64153      330 ------------lYTWTPgd----gAGLNTHDEWQTITLPL------------APIAVa------GIMAPDTWQSLRIAF 375
WP_022276212  326 ------------nYPWNPsa----nGSFNTYGKWCTVSIDL-QT---------VSGNA----------FSEGWTGLSFIL 369 Bacteroides
EFM00818      323 nm----------kLRWNPADq---gVSLNTNGEWRTITLDA-TT---------WFRDNd-----aQPVLKKGSNDFTIVY 374
WP_044161859  435 VNNDfkykgvevkstllhqkVYVDNWRIVP 464 Bacteroides reticulotermitis
WP_052956006  359 GPGEwd------------adISFDNFRIVP 376 Flavihumibacter petaseus
jgi:Dfer_2531 365 GGGDld------------cdMAFDNFRVVQ 382
Q5LH78        351 WAEDt--------------dICFDNFRIVP 366 Bacteroides fragilis NCTC 9343
EGJ99386      362 AGGEset-----------idISFDNFRITP 380
CCX62477      356 EIDAtia-----------rnFAFDNIRICK 374
EGK05722      355 EIDQsia-----------rnFAFDNIRVCK 373
CCY64153      376 QPTAayt-----------adFRIGNIRIER 394
WP_022276212  370 QPNSdwn-----------vdHSFANIRIEK 388 Bacteroides
EFM00818      375 QPHNgfd-----------adFALANLRFVK 393
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