2E67


Conserved Protein Domain Family
YdjC_TTHB029_like
?
cd10802: YdjC_TTHB029_like 
Click on image for an interactive view with Cn3D
Thermus thermophiles TTHB029 and similar proteins
This subfamily is represented by an YdjC-family protein TTHB029 from Thermus thermophilus HB8; it is similar to Escherichia coli YdjC, a hypothetical protein encoded by the celG gene. TTHB029 functions as a homodimer. Each of monomer consists of (beta/alpha)-barrel fold. The molecular function of TTHB029 is unclear.
Links
?
Statistics
?
PSSM-Id: 212113
Aligned: 35 rows
Threshold Bit Score: 224.872
Created: 21-Apr-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
 
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Structure:2E67; Thermus thermophilus YdjC-family protein TTHB029 binds Mg2+ int he active site
  • Comment:This site has a highly negative surface charge.
Scroll to Sequence Alignment Display
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Feature 1                ## #                                             # #                     
2E67_A         13 RVLILHHDDLGLTHAQNGAYQALG----LPTGSVMVPGAWASGVK-------GEDLGVHLVLTSEWPAPRMRPLt---eG 78  Thermus thermo...
EDL56056       28 RYLIIHADDAGMSHSVNQATIEGMqkgiVSSASIMVPCPWFKEFAeyakqnpDQDFGIHLTLNSEWKNYRWGPVasrdlV 107 Planctomyces m...
jgi:Rmar_2484  34 RVLILHADDLGMAHSVNRASTEALeagwISSASIMVPCPWFSEMAayarthpELDFGLHLTLTSEWKYYRWAGLlgpsmT 113 Rhodothermus m...
EDY84173       42 KLLIIHADDLGLAHSKNLATFHAMeegvVTSASVMMTTPWVLEVAhyaqahpEADLGVHLTLTSEWETYKNGPLagrdqV 121 Verrucomicrobi...
jgi:Fjoh_0046  35 KLLIIHADDAGLSHSENQATIKALqngsVNSYSIMVPCPWFYEMAefakknpDFDCGIHLTLTCEWENYKFGPVlpiseV 114 Flavobacterium...
AEM71439       35 KLLIIHADDLGVVHSVNKATFNALeegsVNSASIMVPTPWFPEVAqyakanpDHDLGIHLTLTSEWKLLRWGPVasrseV 114 Muricauda rues...
AEL28463       14 KLLIIHADDAGLAHAENRATIQSLqkgiVNSYSIMVPCPWFYEMAifaknnnQYDNGVHLTLTCEWENYRFGPVlpiseV 93  Cyclobacterium...
EEU51284       30 PRLIIRADDMGSFRSANIACMEGYkngvETCIEVMVVTSWFPEAArllrenpGIDVGLHLTFTSEWDNVKWRPLt---hC 106 Parabacteroide...
AEE52836      516 PRLIIRGDDMGYSHSGNEALIKSYkegiETSIEVIVPSPWFPEAVkmlaqnpGIDVGLHFAITSEWDNIKWRPLt---dC 592 Haliscomenobac...
EFA20685       29 PTLVIRIDDLGALHSVNEACIQTYrsgiARSVEVMPVAAWYPEAIkmlkenpGLDVGLHLVITSEWENVKWRPLt---hC 105 Bacteroides sp...

Feature 1                                                               # # #                     
2E67_A         79 ESLRDEAGYFPes---------lEALWRKARAEEVERELKAQIQAAAKL-FSPTHLDAHQGAVl--rPDLAEVYLRLAEA 146 Thermus thermo...
EDL56056      108 PSLLDEEQYLWdn---------vGQVMQHVNVKDAEKELRAQIERAKKFgVPLSHLDTHMGAVvs-rPDLLEMYVNLGIE 177 Planctomyces m...
jgi:Rmar_2484 114 PSLHSSAGYLHat---------tEEAVANMKPEEVAAELRAQILRAQDAgIPVTHLDTHMGVLfq-tPELFAVYLQVGRE 183 Rhodothermus m...
EDY84173      122 PSLVTEHGYFHat---------vADFAAAADIDQIETEARAQIKAAADSgIAYTHLDGHMGSMla-tDEIAQLYIRLGQE 191 Verrucomicrobi...
jgi:Fjoh_0046 115 SSLADQNGYFYkt---------rKDFKDNAKLSEIKKELIAQIEKALQFgIQPTHLDSHMCSVgv-tPEILDIYRELGKT 184 Flavobacterium...
AEM71439      115 ASLVDTNGYFYsd---------cNKLWENAKIEEVEIELRAQIDKAIAMgINPTHLDSHMGCLfatdPRYYKLYTKLGRE 185 Muricauda rues...
AEL28463       94 PSLVDENGYFFkk---------rDKLAQNAKAEHVEKELTAQIERALKFgIKPTHIDSHMYSVga-kPEFLNVYRRIAKK 163 Cyclobacterium...
EEU51284      107 PSLTDSNGYFLpmmspnpaypglAILENTWSLAEIEQEARAQIEMALKNiPQISHISGHMGSTgf-dPEVVKLMRRLSEE 185 Parabacteroide...
AEE52836      593 PSIRNADGYFYpmiypnshypnqSVMTNAWKIEDIEKELRAQLDMALKYiPRLSHVSGHMNSTaf-aPEVKAMARKVAAE 671 Haliscomenobac...
EFA20685      106 PSLTDENGYFYpmmfpnpaypgqSIMEQKWDIKEIEQEFRAQIETTLKSiPQLSHLSGHMLSTgf-sKEVNELVQRLAKE 184 Bacteroides sp...

Feature 1                                                                                      #  
2E67_A        147 YRLVPLVpesleglgvpppflpelerllyeTPFPQVRFLDPyglpp--------eerlGFYLDLAHLp-PGLYYLVHHSA 217 Thermus thermo...
EDL56056      178 YQLPVLFvanldpkkygl-iaekskelkavLSKNGLPVLDElvqfygep--dygkrkqSYLDKLRGLk-PGVTQIIIHCG 253 Planctomyces m...
jgi:Rmar_2484 184 NNLPVLIpreqlaqqaph-llemltpndlvIDRVWLVPTDTppdr----------wleTYIRMIDNLp-PGITELIVHLG 251 Rhodothermus m...
EDY84173      192 YRVPIRLhqhhadagspklqaaavampgklVQAYGAVPADYpeg-----------mgaHYDQILRDLq-PGLNILVLHLG 259 Verrucomicrobi...
jgi:Fjoh_0046 185 YNLPVFInkgfves---------islsdkqYNFEDTLLADNlligyyad-fekgelrkSYEKALDNVv-SGFNVFLLHPA 253 Flavobacterium...
AEM71439      186 YGIPTMVnhqikqlgge----gapepmeviNQIFGAATQDYdkda----------mskYYADTLKALe-PGVHVMIIHCA 250 Muricauda rues...
AEL28463      164 YKLPLVLnqqlfem----------vglemdLSDFKDELLIDnvfmgefkyfekgelanFYATALDKMe-GGLNLILIHPA 232 Cyclobacterium...
EEU51284      186 YHLPVVDrve-----------------amqEYDFTYSGYDGasktp-------aekeaSFIRMLDKLepGKRYMFLDHPA 241 Parabacteroide...
AEE52836      672 YKIPMVDvd--------------------sANDFKISYTGYdsknkt-----teeriqGFINMLDKLetGKTYVFVEHPG 726 Haliscomenobac...
EFA20685      185 YNLPSIDrmd-----------------sskDYRFTYIGYDGpkrta-------eekeaSFIKALEKLqpGQRYLFLDHPA 240 Bacteroides sp...

Feature 1                             #            
2E67_A        218 Lptpe------gralPDWPTREADYFALSHPEV 244 Thermus thermophilus HB8
EDL56056      254 Idnqel-----qnitHSSSRRDGDRRVFTDPEV 281 Planctomyces maris DSM 8797
jgi:Rmar_2484 252 YandeleaitidhpdFGAAWRARDLDVVRSEAF 284 Rhodothermus marinus DSM 4252
EDY84173      260 YddlemqaitvnhplWGSHWRQIDYDWATAPET 292 Verrucomicrobiae bacterium DG1235
jgi:Fjoh_0046 254 YddfemqgitvnhpnFGSEWRQIDFDFFTSDEC 286 Flavobacterium johnsoniae UW101
AEM71439      251 YynlesqgmsfehpyWGAKWRQNDYDFFTSEEC 283 Muricauda ruestringensis DSM 13258
AEL28463      233 FdddemkgitinhpnFGSEWRQIDFDFFTSEEA 265 Cyclobacterium marinum DSM 745
EEU51284      242 LdneemktvghigyeNVAMDRQGVTDLFTSPKV 274 Parabacteroides sp. D13
AEE52836      727 LdnaelraihhigyeDVAQGRQDVTTIFTSEKV 759 Haliscomenobacter hydrossis DSM 1100
EFA20685      241 LdndemktvfhigyeDVALDRQGVTDLLTSPRV 273 Bacteroides sp. D20

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap