Conserved Protein Domain Family
phageshock_pspF

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TIGR02974: phageshock_pspF 
psp operon transcriptional activator PspF
Members of this protein family are PspF, the sigma-54-dependent transcriptional activator of the phage shock protein (psp) operon, in Escherichia coli and numerous other species. The psp operon is induced by a number of stress conditions, including heat shock, ethanol, and filamentous phage infection. Changed com_name to adhere to TIGR role notes conventions. 09/15/06 - DMH [Regulatory functions, DNA interactions]
Statistics
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PSSM-Id: 274371
Aligned: 18 rows
Threshold Bit Score: 533.028
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
goetting:GOX0930  13 PIGRAPAFLEMLDQVSRLAPLKRPVLVIGERGTGKELVAARLALLSDRWDRPLVKLNCAALPEALLDSELFGHEAGAFTG 92  Gluconobact...
CAI87106          10 LLGQSDSFLSVLDQVSQLANLDKPVLIIGERGTGKELIAARLHFLSKRWEQNYVKLNCAALNENLLESELFGHESGAFTG 89  Pseudoalter...
uhmanoa:IL0732    10 LIGQSNSFSDVLEQVSQIAPLDKPVLIIGERGTGKELIAARCHYLSRRWQQQYVTLNCAALNENLLDSELFGHEAGAFTG 89  Idiomarina ...
AAN54858          10 LIGQSNALLEVLEHVSQIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQNFIKLNCSSLSENLLESELFGHESGAFTG 89  Shewanella ...
AAF94829           5 LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTLSEGLIDSELFGHESGSFTG 84  Vibrio chol...
macrogen:ZMO1061   7 VIGQSTAFLDAVEQASRAASLNRPVLVIGERGTGKELIAERLHRLSSRWASPLVTLNCATLPENLIESELFGYEAGAFTG 86  Zymomonas m...
WP_011044527      10 LLGQSNSFLEVLEQISQVATLSKPVLIIGERGTGKELVAARLHFLSKRWEQSYLKLNCAALNENLLETELFGYDSGAFTG 89  Colwellia p...
WP_011399171       8 LIGSSEELHRVLQQVSQVAPLNRPVLIIGERGTGKELIAERLHYLSSRWEQPYLQVNCAAMSETLLESELFGHDAGAFTG 87  Hahella che...
WP_011368972      14 ALGSSDVFLAFQEHVSRAAKVERPVLLLGERGTGKELAATRLHYLSSRWQGPLVTLNCAAISPALMESELFGHESGAFTG 93  Desulfovibr...
WP_011648260       8 LIGESAAWLSALEQASRVAPLDRSVLVIGERGTGKELVGERLHFLSKRWEGPFIKVNCAALSETLLDSELFGHERGAFTG 87  Hyphomonas ...
goetting:GOX0930  93 AQKRRLSRFERADGGTMFLDEIGTASQAVQEKLLRVIEYGSFERVGGSETIRVDVRLIGATNADLPAMAREGRFRADLLD 172 Gluconobact...
CAI87106          90 ASKRHEGRFERANSGTLFLDELANTSEMVQEKLLRVIEYGEFERVGGKQTIKVDTRLVCATNEDLPYLAQQGEFRSDLLD 169 Pseudoalter...
uhmanoa:IL0732    90 AAKKHEGRFERADSGSLFLDELANTSLRVQEKLLRVIEYGEFERVGGRHSVKVDTRLIAATNEDLPSLAAKGQFRSDLLD 169 Idiomarina ...
AAN54858          90 AKGKHEGRFERADGGTLFLDELANTSGLIQEKLLRVIEYGEFERVGGSKTMQADVRLICAANEDLPSLAEAGEFRADLLD 169 Shewanella ...
AAF94829          85 AKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLD 164 Vibrio chol...
macrogen:ZMO1061  87 AMRAKTGRFEQAEGGTLFLDELATLSSSAQERLLRAVEYGEINRIGSIRPTKVDVRIVAATNEDLPSLAARGQFRSDLLD 166 Zymomonas m...
WP_011044527      90 ASKRHEGRFERADKGTLFLDEIANTSGLIQEKLLRVVEYGEFERVGGSRTINSDVRLVAATNEDLPTLAASGQFRADLLD 169 Colwellia p...
WP_011399171      88 ATRGRAGLFERADGGTLFLDELATASMQVQEKLLRVIEYGRFERLGGNKTLHVDVRVVAATNADLPTMAAGGRFRGDLLD 167 Hahella che...
WP_011368972      94 AERQRRGRFEQAHGGTLFLDEIGNMPPAMQEKILRVVEYGVFERVGGSHAVETDVRIVAATNVDLARMADAGRFKRDLLD 173 Desulfovibr...
WP_011648260      88 ATDMRRGRFEMADGGTIFLDEIATASQQVQEKLLRIVEYGEFQRVGGSKVLSTNVRIVAATNADLPALAEAGAFRWDLLD 167 Hyphomonas ...
goetting:GOX0930 173 RLAFDVVNIPPLRARPEDIPLLAGHFATRMSAELGRKVfAGFTDRALARLQAYDWPGNVRELRNVVERSVYR----MdrP 248 Gluconobact...
CAI87106         170 RLAFDVITLPPLRERQGDIMLLAEQFAMNMARDLEWQLfSGFTRSATETLLSYDWPGNIRELKNVVERSLYR----HgsE 245 Pseudoalter...
uhmanoa:IL0732   170 RLAFDVITLPPLRERRDDIMLLAEHFAISMAREMELELfSGFSEKARKTLLEYHWPGNVRELKNTVERSLYR----LgnG 245 Idiomarina ...
AAN54858         170 RLAFDVITLPPLRCRPEDIMTLAEYFAVGMARQLKLELfSGFSANAIEQLMSHDWPGNIRELKNVVERSVYR----NygE 245 Shewanella ...
AAF94829         165 RLAFDVIHLPALRHRPEDIALLAEHFAIRMCRELQLPLfVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQ----HglN 240 Vibrio chol...
macrogen:ZMO1061 167 RLSFEVITLPPLRYRQEDIPLLAEYFGRHMALELGWDNwLGFTAEAMVILKEHSWPGNVRELRNVVERSLYR----WgdA 242 Zymomonas m...
WP_011044527     170 RLAFDVITLPPLRERLDDIIMLAEHFAMNMARELEFELfSGFTEKAKRSLLEYHWPGNIRELKNVVERSVYR----CnnP 245 Colwellia p...
WP_011399171     168 RLAFDVISLPPLRFRKDDIRELAEHFALKMSIELGYDWfAGFAPEAMTQLMNYHWPGNVRELKNVVERSVYR----HgaQ 243 Hahella che...
WP_011368972     174 RLAFEVLTLPPLRERGEDIMLLARRFAASMAAELGRPEtPRFTPHAEAALKNHSWPGNVRELKNTVERAVFH----S--D 247 Desulfovibr...
WP_011648260     168 RLSFDVITLPPLRARQGDKTLLAQFFARRMAVEMAQDf-PGFAPSALEAIEAWHWPGNIRELRNFAERLTHRalisApfE 246 Hyphomonas ...
goetting:GOX0930 249 ERALDEIVLDPFVTPDwQGMAAPAAGPVGSVSIGEP---------------L---------------------------- 285 Gluconobact...
CAI87106         246 QIPVHQIILDPFESRF-RPKPRVKPTAFVNNNINTP---------------Epavaaapvaq---------alpsaapin 300 Pseudoalter...
uhmanoa:IL0732   246 HVPIHDIIIDPFNSPFrPKTPVTEKAVPQEPVANEQ---------------Snaesneli--------------dmpkln 296 Idiomarina ...
AAN54858         246 NRPIEHIILDPFASPY-RPTTRIRTRE--RQITPLP---------------Hvpltsppvvttitd-tevvgtsesmtfn 306 Shewanella ...
AAF94829         241 SQPIDQLVFNPFQSSDiVTDESEQVDVRHTTRTDF--------------------------------------------- 275 Vibrio chol...
macrogen:ZMO1061 243 TKPINHIVLDPFTSPWrPVQEATIVENVTVKDTVIA---------------Gkkvslpp---------------sdfikk 292 Zymomonas m...
WP_011044527     246 HLPVHELIIDPFESPFrPNQRIKTHDRVNELNKNNI---------------Stsdnvvddsvtvkpsavdtakvapkvvt 310 Colwellia p...
WP_011399171     244 EQVLREVVIDPFDSPWr-PSGLVEEAKPVEPKTMQP---------------Epds-----------------------ia 284 Hahella che...
WP_011368972     248 GALIDTIETDPFVSPWrQGLAAPYPEHHGTENPDPP---------------Sqrpqapc----------------pqgdt 296 Desulfovibr...
WP_011648260     247 QVRFETSALDPFASPWrPK-NAPKSSPKNSNETSNEagknsngvgvflgasSpss-----------------------aa 302 Hyphomonas ...
goetting:GOX0930 286 -TFP-------RD--------FGADVRAHERSLLEAALREAQFSQRRAAELLGLTYYQFRHHLRLH 335 Gluconobacter oxydans 621H
CAI87106         301 tEFP-------CS--------LKKLSNDFEILMINKALEHSQFNQKKTAEVLGLTYHQLRGYLKKY 351 Pseudoalteromonas halopla...
uhmanoa:IL0732   297 aEQP-------ID--------FKQKSQEYEIDVLSQALRLCQFNQKKTANFLGLTYHQLRGYLKKY 347 Idiomarina loihiensis L2TR
AAN54858         307 fNFP-------LD--------FKEQTERYEMELIQQALSASQYNQKKTAEILGLSYHQLRGILKKY 357 Shewanella oneidensis MR-1
AAF94829         276 -HLP-------LD--------YKAWQQQCDIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325 Vibrio cholerae O1 biovar...
macrogen:ZMO1061 293 aLQD-------GD--------LKALCQDYERHCVEQALQRHCYNQRATAKALHLSYDQLRHILRRY 343 Zymomonas mobilis subsp. ...
WP_011044527     311 qQFP-------QS--------LKTLSQEYEIELIQTALAHCQFNQKKTAEALELTYHQLRGYLKKY 361 Colwellia psychrerythraea
WP_011399171     285 eAES-------LD--------LRTRMAQFEQRLIAEALAANQFHQKRAADALGLTYHQLRAALRKY 335 Hahella chejuensis
WP_011368972     297 aPFPssvpdlsIP--------LQRAAHALEQEYLRAALERTRHNQRQAAELLGLTYHQFRGLFRKH 354 Desulfovibrio alaskensis
WP_011648260     303 eLQP-------AErpqspargFEDAVRLFEMQLIDGALADAGGHQGRAADALGLTYHQLRGLLKKH 361 Hyphomonas neptunium
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