Conserved Protein Domain Family
SBD

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pfam17882: SBD 
OAA-family lectin sugar binding domain
This domain is found in agglutinin family of lectins. Oscillatoria agardhii agglutinin (OAA)- family lectins comprise either one or two homologous domains, with a single domain possessing two glycan binding sites. OAA is one of the lectins with anti-HIV activity. This sugar binding domain is also found in Pseudomonas fluorescens agglutinin (PFA) and myxobacterial hemagglutinin (MBHA), where MBHA contains two sugar-binding domains (i.e. 4 sugar binding sites), whereas OAA and PFA are single-domain proteins (i.e. 2 sugar binding sites).
Statistics
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PSSM-Id: 465550
Aligned: 57 rows
Threshold Bit Score: 57.7021
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EAW46463             561 GEYTCSVKWGGETG-T--WRkeSEPEHLLI---SPQGEVqfrsrfgLAVIQnltvdeqrlswnfgdnqtaasitfkvnse 634 
jgi:SACTE_4545        22 TVYDTEVRAEGE------WE--RAPRLTVR---LDRGEA-------TELVElawrse---------------------dg 62  
KIF67056             158 RTFATERRTLDAPT----WQ--PGPSLVFH---LDGGEG-------GSAESatrlswrt------------------tdg 203 
WP_006137055         156 RTYATERRPLGAPV----WQ--PGPTLTVH---LDQGGTpagpagqEPPARlawrgt---------------------dg 205  Strept...
SCD89756             159 VTFDTHVRAPGTTA----WQ--PAPPVRFH---LDAGGR-------AVPAQlswrgt---------------------dg 201 
OQD56638             156 VAFTTEVRAPGSTA----WQ--PASRLLFHiesIDSGER-------ALPAHlswrgt---------------------dg 201 
KOT44172             160 FTYRTEIRPAHAAFaP--WQ--AAQRLLFH---IDRDEH-------SLPAQlgwrge---------------------gg 204 
ODA69171             160 FTYRTERRSAHASP-SrsWQ--AAPRLLFH---IDRDEH-------SLPAQlswkgd---------------------dg 205 
SIO85026             157 LRYTTRKRVQSAEGsEqrWE--PGGRLLVY---VDRGEM-------APIAQlswrdt---------------------dg 203 
mmlSJTU:SCATT_04240   14 FVFRTERRWDGADA----WE--PGPWLRVG---IERDER--------PPLDrlgwrty--------------------dg 56  
EAW46463             635 dsyfWEDNQTGKLFQGWLNYPNEGRIDFRGRLV 667 
jgi:SACTE_4545        63 aeatVVFDGGTGRFRGHRRAADGTPQEYRGTES 95  
KIF67056             204 aesaVAFRSDLSGFHGHFRAGDGTIGELRGTLT 236 
WP_006137055         206 tessVAFRTDLSGFHGHVRGPEGSLGEVRGALT 238  Streptomyces griseoaurantiacus
SCD89756             202 seasVGLGADLSGFLGHRRAADAKVTEYRGTLT 234 
OQD56638             202 seaaIGLRADLSGFLGHRTTAEGAVTEYRGSPA 234 
KOT44172             205 aeaaISFQSTMSDFHGVYRTADGTAYEYRGRLT 237 
ODA69171             206 tetaISFQSNMSDFHGVHRAADGTAYEYRGRLT 238 
SIO85026             204 aeaaISFQSALGDFHGYHRSADGLLSEYRGDLE 236 
mmlSJTU:SCATT_04240   57 aeaaVGFRAAMEGFYGHYRAADGAPAEYRGELE 89  
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