3MTC


Conserved Protein Domain Family
INPP5c_INPP5B

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cd09093: INPP5c_INPP5B 
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Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
This subfamily contains the INPP5c domain of type II inositol polyphosphate 5-phosphatase I (INPP5B), Oculocerebrorenal syndrome of Lowe 1 (OCRL-1), and related proteins. It belongs to a family of Mg2+-dependent inositol polyphosphate 5-phosphatases, which hydrolyze the 5-phosphate from the inositol ring of various 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), and to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. INPP5B and OCRL1 preferentially hydrolyze the 5-phosphate of phosphatidylinositol (4,5)- bisphosphate [PI(4,5)P2] and phosphatidylinositol (3,4,5)- trisphosphate [PI(3,4,5)P3]. INPP5B can also hydrolyze soluble inositol (1,4,5)-trisphosphate [I(1,4,5)P3] and inositol (1,3,4,5)-tetrakisphosphate [I(1,3,4,5)P4]. INPP5B participates in the endocytic pathway and in the early secretory pathway. In the latter, it may function in retrograde ERGIC (ER-to-Golgi intermediate compartment)-to-ER transport; it binds specific RAB proteins within the secretory pathway. In the endocytic pathway, it binds RAB5 and during endocytosis, may function in a RAB5-controlled cascade for converting PI(3,4,5)P3 to phosphatidylinositol 3-phosphate (PI3P). This cascade may link growth factor signaling and membrane dynamics. Mutation in OCRL1 is implicated in Lowe syndrome, an X-linked recessive multisystem disorder, which includes defects in eye, brain, and kidney function, and in Type 2 Dent's disease, a disorder with only the renal symptoms. OCRL-1 may have a role in membrane trafficking within the endocytic pathway and at the trans-Golgi network, and may participate in actin dynamics or signaling from endomembranes. OCRL1 and INPP5B have overlapping functions: deletion of both 5-phosphatases in mice is embryonic lethal, deletion of OCRL1 alone has no phenotype, and deletion of Inpp5b alone has only a mild phenotype (male sterility). Several of the proteins that interact with OCRL1 also bind INPP5B, for examples, inositol polyphosphate phosphatase interacting protein of 27kDa (IPIP27)A and B (also known as Ses1 and 2), and endocytic signaling adaptor APPL1. OCRL1, but not INPP5B, binds clathrin heavy chain, the plasma membrane AP2 adaptor subunit alpha-adaptin. In addition to this INPP5c domain, most proteins in this subfamily have a C-terminal RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain.
Statistics
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PSSM-Id: 197327
Aligned: 15 rows
Threshold Bit Score: 435.589
Created: 2-Jun-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:putative catalytic site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                                                #                      
3MTC_A          8 FRFFAGTYNVNGq-----SPKECLRLWLSng--------------iqAPDVYCVGFQE-LDLSKEAFFFhdt---pkEEE 64   human
NP_569962     185 IIIYCATWNVNNkt--csDSNNPLRAWLAcs--------------ekPPDIYAIGLQE-LDTPTKAMLNstqv-qaiEKQ 246  fruit fly
EFA77723      122 MVIFLGTWNVNGk-----KPAESLDQWLCpgagveggglsasagaalSPDIYAIGFQE-LDLTAEALLLgdt---trALP 192  Polysphondyli...
EEY59786       87 TRVVTGTWNVNAkkplgpSEASKIVHWLHpptte---------srrePPDIVALGFQEiVDLNAVNVVVnsamtvqrSSA 157  Phytophthora ...
XP_002287881  183 GRIFVGTWNVNAk-----GKDESLASWLCadwa-----------qhgPPDVVVVGFQEmVDLNAVNVAVenks-qqrSQF 245  Thalassiosira...
XP_797066     400 FRAFVGTWNVNGk-----GATEDLRNWLAad--------------pkPPDMYAIGFQE-LDLSKEAFLFnds---irEEE 456  purple urchin
XP_002122014  186 FNVFVGTWNVNGq-----LPTEPLDAWVSse--------------atPPDVYAIGFQE-LDLSKEAFVFtes---srEEE 242  Ciona intesti...
XP_002159580    5 FSVFTGTWNVNGq-----LAIECLKPWIDcn--------------tePPDVLAIGFQE-LDLSAEALVFnds---srEDL 61   green hydra
XP_002117524    1 LRVTACTWNVNGq-----LTSEDISEWLRke--------------dgNSDIIAIGFQE-LDLSAEALLQlke--ssrAEE 58   Trichoplax ad...
EFA09929      178 FSIFVGTWNVNGq-----PPSVSLRPWLSfd--------------eePPDLYAIGLQE-IDLSKEAFLFndt---prEAE 234  red flour beetle
Feature 1                                                                                         
3MTC_A         65 WFKAVSEGLHpd-----------akYAKVKLIRLVGIMLLLYVKQEHAAYIs--EVEAETVGTGIMgrmGNKGGVAIRFQ 131  human
NP_569962     247 WIDKMMDSVHpd-----------veYEILMSHRLVATMLTVIVRKQLRQHIircRPKSVARGIFNTl--GNKGGVAISLQ 313  fruit fly
EFA77723      193 WEQAIAASLAtq-----------geYVKLLSRQLVGILLFVYVRKEHRPHIthvLSDIAAVGIMGMm--GNKGGVAVRFQ 259  Polysphondyli...
EEY59786      158 WEEAMLTALNryigapagssdtsvqYRVVLEKHLVGILLLVFVRTDHWDHVkeiKGATAGVGIMGVm--GNKGGAAVRLK 235  Phytophthora ...
XP_002287881  246 WVDRIRNTLNgrentg---gdpmraYTQLAVKYLVGLLVCVFVKAPHKPRVk--HVHTDSVGVGVMgvmGNKGGVSIRLQ 320  Thalassiosira...
XP_797066     457 WHKRVIMCLHqd-----------gvYIKLKLIRLVGMMLLVFIQERHYPYId--EVIAGTVGTGIMgkmGNKGAVAVRFN 523  purple urchin
XP_002122014  243 WMRAVKQALHpg-----------asYKLVKHIRLVGMMLLVFAQDRHLQDIt--AVASHHVGTGLLgkmGNKGGVGIRIM 309  Ciona intesti...
XP_002159580   62 WIKAVENALPkr-----------adYFKLKHVRLVGMMLVVYVQTKHKMQVlnlEAETNATGIMGMm--GNKGGVAIRFQ 128  green hydra
XP_002117524   59 WVKIVDKHLPi-------------dMCKVRGIRLVGMLLLVYAKSNLREFIt--EIHADHVGTGIMgmmGNKGGVAVRFK 123  Trichoplax ad...
EFA09929      235 WVKYVMDGVHsk-----------akYKSVAVTRLVGMQLIVLVNSKHYQFVk--NVAVDTVGTGLLgkmGNKGGVAVRLE 301  red flour beetle
Feature 1                    #                                                              # #   
3MTC_A        132 FHNTSICVVNSHLAAHieeYERRNQDYKDICSRMqfcqpdps----------------lppltisnHDVILWLGDLNYRI 195  human
NP_569962     314 LNEGNICFVNSHLAAHmgyVEERNQDYNAIVEGIrfddg----------------------rtisdHDHIFWVGDLNYRI 371  fruit fly
EFA77723      260 FYNTSICIINSHLNAHmenILRRNQDMKDIARTLkfaaedgs-----------------tflnifdHDQLFWIGDLNYRI 322  Polysphondyli...
EEY59786      236 FYSSTLCFVCAHLAAHrenVAGRNADYLNIMSKIqfeesvedgttapvq--dlsgrfwsgepsilnHDFVFWIGDLNYRI 313  Phytophthora ...
XP_002287881  321 FYDSTLCFVCTHLAAHrenVAGRNADFANVFNKTsfeigdeavkeviklgslnqwatgtnsvgvsdHDLVFWFGDLNYRV 400  Thalassiosira...
XP_797066     524 FHNTSFCFINSHLAAHmeeYERRNQDYHDICARMkferehh------------------qplgvmqHDVVIWMGDLNYRI 585  purple urchin
XP_002122014  310 LHNSSLCFINSHLAAHleeIQRRNQDYEDICSRMkfpdpeg------------------qsisvfsNDVLIWLGDLNYRI 371  Ciona intesti...
XP_002159580  129 LHNSTICFVNSHLAAHqteYERRNQDYREVYNKIkftqfqp-------------------hlsisdHDVIIWMGDLNYRF 189  green hydra
XP_002117524  124 LHLTTMCFVNSHLAAHaeeIEKRNQDFKEVSSKLfsrssq--------------------plsvldHETTFWFGDLNYRI 183  Trichoplax ad...
EFA09929      302 LHNTSLCFVNCHLAAHieeFERRNQDYKDINARInfrkqp---------------------qsikdHEQVYWLGDLNYRI 360  red flour beetle
Feature 1                                                                                    #    
3MTC_A        196 Ee-lDVEKVKKLIEEKD-FQMLYAYDQLKIQVaaktvFEGFTEGELTFQPTYKYDTGSDDWDTs--eKCRAPAWCDRILW 271  human
NP_569962     372 Qe-pPGQQRPGPLSDAQtYELLLQYDQLRQEMrrgkcFEGYTEGEIKFRPTYKYDPGTDNYDSs--eKQRAPAYCDRVLW 448  fruit fly
EFA77723      323 Pl--PDQEVRDKIIQKD-FYSLFLADQLYLQMksgaaFEGFQEPPISFAPTYKYDPGTNDYDSs--eKKRTPAWCDRILW 397  Polysphondyli...
EEY59786      314 QdslTTEEVFRLAESGHsLNELQQHDQLTNERragrvLRGFEEGPLAFPPTYKFQAGTSEYEKrpekKLRAPAWCDRVLW 393  Phytophthora ...
XP_002287881  401 DesiPTERVMELSEKNL-LEELIEHDQLNVERaqgrvFQDFEEGPLNFQPTYKYQPGTDLYEKrpdkKLRAPAWCDRILW 479  Thalassiosira...
XP_797066     586 Nd-lAVDTVKTLIYNNS-FKELLMQDQLNRQRelsrvFKGFDEAPIGFLPTYKYNSGSDEWDSs--eKQRVPAWCDRILH 661  purple urchin
XP_002122014  372 Dk-lPLETVKERIEKGQ-YEKLKEHDQLTNQRregnvYPDFEEGDLTFRPTYKYNPGTDEWDTs--eKCRCPAWCDRILW 447  Ciona intesti...
XP_002159580  190 Ee-lDPDQVKKLSDDMD-YDKLYLNDQLNWQRnlgkvFEGFSEGQINFKPTYKYDPGTDNWDTs--eKFRAPAWCDRILW 265  green hydra
XP_002117524  184 Ag--NEAIVKDMIKSGL-LDDLFKFDQLNQQMsqrkvFQNFIEGPIKFIPTYKYDPGTNNWDTs--eKCRAPAWCDRILW 258  Trichoplax ad...
EFA09929      361 Td-lNTQQVKTLLARNE-IVTLLKADQLNQQKdrghvLLDYTEGDITFHPTYKYDLNTDTFDTs--eKARPPAWTDRILW 436  red flour beetle
Feature 1                                        ##         
3MTC_A        272 kg------------knITQLSYQSHMALkTSDHKPVSSVFDI 301  human
NP_569962     449 kg------------trIEQLAYNSIMEIrQSDHKPVYAVFQV 478  fruit fly
EFA77723      398 kthk--------kaenVGILSYRRHELL-SSDHRPVSASFII 430  Polysphondylium pallidum PN500
EEY59786      394 rakt---------ptdVKLRCYSSVPVLdLSDHKPVHALFDI 426  Phytophthora infestans T30-4
XP_002287881  480 laqe---------pghVAQLNYTRSELN-CSDHKPVMSTFLV 511  Thalassiosira pseudonana CCMP1335
XP_797066     662 rg------------acIVPKVYRSHMKLrLSDHKPVSALYDI 691  purple urchin
XP_002122014  448 kesakakprktkrkdlVQLLKYQAHLSLkISDHKPVSAVFKI 489  Ciona intestinalis
XP_002159580  266 kg------------knIQQITYRSHIELrLSDHKPVSSLFNV 295  green hydra
XP_002117524  259 ka------------tnVLFVDYRSHPSLkCSDHKPVSASFNV 288  Trichoplax adhaerens
EFA09929      437 rg------------egIYQTAYRSHMDVrISDHKPVSALFKS 466  red flour beetle

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