4B8E


Conserved Protein Domain Family
SPRY_PRY_TRIM25

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cd13736: SPRY_PRY_TRIM25 
Click on image for an interactive view with Cn3D
PRY/SPRY domain in tripartite motif-containing domain 25 (TRIM25)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM25 proteins (composed of RING/B-box/coiled-coil core and also known as RBCC proteins). TRIM25 (also called Efp) ubiquitinates the N terminus of the viral RNA receptor retinoic acid-inducible gene-I (RIG-I) in response to viral infection, leading to activation of the RIG-I signaling pathway, thus resulting in type I interferon production to limit viral replication. It has been shown that the influenza A virus targets TRIM25 and disables its antiviral function.
Statistics
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PSSM-Id: 293971
Aligned: 4 rows
Threshold Bit Score: 336.854
Created: 18-Oct-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putativeheterodimer
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:putative heterodimer interface [polypeptide binding site]
Evidence:
  • Comment:Comparison with other B30.2/SPRY structures and analysis of the loop regions identified a putative binding pocket likely to be involved in binding target proteins
  • Structure:Mus musculus SPRY domain of TRIM25 ; key residues tested by mutagenesis for binding to RIG-I caspase recruitment domains (CARDs)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    # ##                             
4B8E_A     25 VIFDYNTAHnkVSLSNKyTTASVSDGlqhYRSHPQRFTyCSQVLGLHCYKNGIHYWEVELQKNNFCGVGICYGSMERqgp 104 house mouse
Q14258    459 VILDYNTAHnkVALSECyTVASVAEMpqnYRPHPQRFTyCSQVLGLHCYKKGIHYWEVELQKNNFCGVGICYGSMNRqgp 538 human
AAH45450  482 LHFDVRTAHkrISLSENnTKATVSDDpanYPEIPHRFSvCSQVLCTKGFSQGRHYWEIKMSSNNFCGLGLAYGKIDRkgp 561 Danio rerio
KFW06306  233 ITLDYNTAHnkVILSERyTKMSVSDTplhYNHHPQRFTdCSQVLGFQCFKRGIHYWEVELQQNNFCGIGICYGSMARqgp 312 northern fulmar
Feature 1                                                                           #  #      
4B8E_A    105 ESRLGRNPNSWCVEWFNnKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVTeKVHLMYKFKVDFtEALYPAFWVF 184 house mouse
Q14258    539 ESRLGRNSASWCVEWFNtKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVAdKVHLMYKFRVDFtEALYPAFWVF 618 human
AAH45450  562 SSRLGRNAESWCVEWFNvKLSAWHNSFETVLENPNPSRVGILLDCDQGSATFYNVQdRAYPFHTFVFPFtEAVYPAFWIF 641 Danio rerio
KFW06306  313 ESRLGRNSSSWCIEWFNsKISSWHNDVEKCLPSVKATKIGVLLHCEGGFVIFMAVGqKHNLIYKFKTQFtEALYPAFWVF 392 northern fulmar
Feature 1              
4B8E_A    185 SagTTLSIC 193 house mouse
Q14258    619 SagATLSIC 627 human
AAH45450  642 SngSSVSLC 650 Danio rerio
KFW06306  393 SsgTVLSLC 401 northern fulmar

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