1DRM


Conserved Protein Domain Family
sensory_box

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TIGR00229: sensory_box 
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PAS domain S-box
The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. [Regulatory functions, Small molecule interactions]
Statistics
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PSSM-Id: 272971
Aligned: 34 rows
Threshold Bit Score: 86.576
Created: 7-Oct-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DRM_A          2 RETHLRSILHTIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNI-LMPEPDRSRHDSYISRYRtT-SDPHIIGI 79   Bradyrhizobiu...
P38097        300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ-LTWPEDLNKDLQQVEKLI-S-GEINTYSM 376  Escherichia c...
AAC45438      611 SEARWKAVYENSAAGIVLTDPENRILNANPAFQRITGYGEKDLEGLSMEQ-LTPSDESPQIKQRLANLL-Q-GGGAEYSV 687  Pseudomonas p...
WP_010871673  148 SEQKFRLAFENANVGMCMVDLEGHLIKVNDKMGKIFGYSRQELEKMTVND-LAVPEDKQVSPTFIQNAI-T--EHQDHAT 223  Synechocystis...
WP_010873950  571 SEERFRQTFQTTAVSSALISLDGKFLEVNPAFCELLGYTSDELQDHDVAE--VTDPNWVPFQGDLTQQL-LnREIMAYTQ 647  Synechocystis...
WP_010871488  283 QLKILSQACEQSPASIVITDVQGNITYVNPKFEEISGYKSAEVLGRNPRI-LKSGNKTQEDYELMWKTL-AsGR-NWHGE 359  Synechocystis...
WP_010878273   86 RERKFKALAELSP-AGILVHHQGTILFVNEALCQIHGYTREELLNRKVWD-LIHPDYHDLARAMMQKRL-E-GE-KPVYE 160  Archaeoglobus...
AIG99094      144 SEEFHRSLIEESV-APVAIVQDGVFVYANRAFEEITGYTREELNGVNPFEfFIHPDDRNAVLEKYLRLI-S-GESDVESH 220  Archaeoglobus...
AIG97229      527 SEELYRTLAEHSH-TGIFIIQNDKVVYGNEKLREILGYTIEEVNSLEHPYkVLHPDFYDKVVERYRARE-R-GEEVPNSY 603  Archaeoglobus...
WP_010878949  124 SEEFYRTLIEDSL-TPVYIIQGGKMVYVNRAFEEFTGYTKDEVVGRSPFFiIHPEDREGVYAKYIERES-G-KRDVDVYS 200  Archaeoglobus...
1DRM_A         80 GRIVtgKRRDGTTFPMHLSIGEMq--SGGEPYFTGFVRDLTEHQQTQARL 127  Bradyrhizobium japonicum
P38097        377 EKRY--YNRNGDVVWALLAVSLVrhtDGTPLYFIAQIEDINELKRTEQVN 424  Escherichia coli K-12
AAC45438      688 ERSYl--CKNGSTIWANASVSLMpqrVGESPVILQIIDDITEKKQAQENL 735  Pseudomonas putida
WP_010871673  224 LEKr-yIHRQGHIIYGEVSTSLVrgiNGEPLYFISHVKDISKRVKYEQEI 272  Synechocystis sp. PCC 6803
WP_010873950  648 ERRY--QHRDGRWIWGLLNVSLVrdaQQQPLYYVCQIQNIDPLKQAQEKL 695  Synechocystis sp. PCC 6803
WP_010871488  360 FHN---RRKNGELYWERASISPIsnqQGIVTHYVAVKEDITKEKQQAEAL 406  Synechocystis sp. PCC 6803
WP_010878273  161 LKTI---RKDGSERWVLVAGGAId--WDGKKSVMAFAIDITDKKMIEQrl 205  Archaeoglobus fulgidus
AIG99094      221 DFRV--FSKSGREIWASVRGSRIs--LNGRSAVAITAIDITELKKSEEFH 266  Archaeoglobus fulgidus DSM 8774
AIG97229      604 EVKVl--TKDGKEKWLKVLASRIs--YRGKPAVMANIADITDLKEREEML 649  Archaeoglobus fulgidus DSM 8774
WP_010878949  201 WRII---TKRGEVRWLTARPSRIt--YKGRPAVAATVVDTTSIHELNERL 245  Archaeoglobus fulgidus
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