1GEH,2CWX


Conserved Protein Domain Family
rubisco_III
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TIGR03326: rubisco_III 
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ribulose bisphosphate carboxylase, type III
Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis. [Energy metabolism, Sugars]
Links
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Statistics
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PSSM-Id: 188307
Aligned: 7 rows
Threshold Bit Score: 701.142
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1GEH_A        11 YYVDKGYEPSKkRDIIAVFRVTPaEGYTIEQAAGAVAAESSTGTWTTLypWYEQERWADLSAKAYDFHDMGDGSw----I 86  Thermococcus ko...
WP_010868329  12 DFVDLNYEPGR-DELIVEYYFEP-NGVSPEEAAGRIASESSIGTWTTL--WKLPEMAKRSMAKVFYLEKHGEGY-----I 82  Pyrococcus abyssi
WP_010879134   9 EYVDKSYEPQK-DDIVAVFRITPaEGFTIEDAAGAVAAESSTGTWTSLhpWYDEERVKGLSAKAYDFVDLGDGSs----I 83  Archaeoglobus f...
WP_011323101   5 DFLDESYEPSD-DDLVCTFRLVPgEGISVADAAARVASESSNGTWAALspESDVRQYSALACDIGPEDEHGT-------Q 76  Natronomonas ph...
WP_004043974   7 DFLDLDYEPTD-EDLVCTFRIDPaTGMSTEAAASRVASESSNGTWAALqtGAD---FTDMGATTFDI----DGD-----L 73  Haloferax volcanii
WP_010870747   2 DYINLNYRPNE-GDLLSCMVI---KGENLEKLANEIAGESSIGTWTKVqtMKS-DIYEKLRPKVYEIKEIGEENgykvgL 76  Methanocaldococ...
2CWX_A        13 DFVDLNYEPGR-DELIVEYYFEP-NGVSPEEAAGRIASESSIGTWTTL--WKLPEMAKRSMAKVFYLEKHGEGY-----I 83  Pyrococcus hori...

1GEH_A        87 VRIAYPFHAFEEANLPGLLASIAGNIFGMKRVKGLRLEDLYFPEKLIREFDGPAFGIEGVRKMLEIKDRPIYGVVPKPKV 166 Thermococcus ko...
WP_010868329  83 AKIAYPLTLFEEGSLVQLFSAIAGNVFGMKALKNLRLLDFHPPYEYLRHFKGPQFGVKGIREFMGIKDRPLTATVPKPKM 162 Pyrococcus abyssi
WP_010879134  84 VRIAYPSELFEPHNMPGLLASIAGNVFGMKRVKGLRLEDLQLPKSFLKDFKGPSKGKEGVKKIFGVADRPIVGTVPKPKV 163 Archaeoglobus f...
WP_011323101  77 VTVAYPSGLFEDGSLPQILSCIAGNIMGMKAVETIRLLDCEWPAVIARSFPGPQYGSDVRTELLDAGDRPPLATVPKPKV 156 Natronomonas ph...
WP_004043974  74 IRVAYPAGLFEPGNMPQVLSCIAGNIMGMKAVDTIRLLDCEWPESVVSAYPGPLYGSSVREEIFGVTDRPITATVPKPKV 153 Haloferax volcanii
WP_010870747  77 IKIAYPLYDFEINNMPGVLAGIAGNIFGMKIAKGLRILDFRFPAEFVKAYKGPRFGIEGVRETLKIKERPLLGTIVKPKV 156 Methanocaldococ...
2CWX_A        84 AKIAYPLTLFEEGSLVQLFSAVAGNVFGMKALKNLRLLDFHPPYEYLRHFKGPQFGVQGIREFMGVKDRPLTATVPKPKM 163 Pyrococcus hori...

1GEH_A       167 GYSPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITADLLEMEQRLEVLAD 246 Thermococcus ko...
WP_010868329 163 GWSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVKKLYRVRDRVEAETGETKEYLINITGPVNVMEKRAELVAN 242 Pyrococcus abyssi
WP_010879134 164 GYSAEEVEKLAYELLSGGMDYIKDDENLTSPAYCRFEERAERIMKVIEKVEAETGEKKSWFANITADVREMERRLKLVAE 243 Archaeoglobus f...
WP_011323101 157 GLSTEEHVSVAESAWRGGVDLLKDDENLTDQTFNPFEQRVADSFAARDRLEEETGERKDYLVNITAETDEMVRRAEFVDD 236 Natronomonas ph...
WP_004043974 154 GLSTAAHAQVGYDAWVGGVDLLKDDENLTDQAFNPFSDRLTESLSLRDDAEDETGEKKSYLINVTADTQTMLDRVDEVAA 233 Haloferax volcanii
WP_010870747 157 GLKTEEHAKVAYEAWVGGVDLVKDDENLTSQEFNKFEDRIYKTLEMRDKAEEETGERKAYMPNITAPYREMIRRAEIAED 236 Methanocaldococ...
2CWX_A       164 GWSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITGPVNIMEKRAEMVAN 243 Pyrococcus hori...

1GEH_A       247 LGLKHAMVDVVITGWGALRYIRDLAADYGLAIHGHRAMHAAFTRNPYHGISMFVLAKLYRLIGIDQLHVGTAgAGKLEGG 326 Thermococcus ko...
WP_010868329 243 EGGQYVMIDIVVAGWSALQYMREVTEDLGLAIHAHRAMHAAFTRNPKHGITMFALAKAARMIGVDQIHTGTA-VGKMAGD 321 Pyrococcus abyssi
WP_010879134 244 LGNPHVMVDVVITGWGALEYIRDLAEDYDLAIHGHRAMHAAFTRNAKHGISMFVLAKLYRIIGIDQLHIGTAgAGKLEGQ 323 Archaeoglobus f...
WP_011323101 237 HGGSFVMVDIITCGWSGLQTVRRRTEDLDLAIHAHRAMHAAFDRLPQHGVSMRCLAQFARLAGVDHIHTGTAgLGKLE-- 314 Natronomonas ph...
WP_004043974 234 QGGEYVMVDIITAGWAGLQTVRERTEKHGLAIHAHRAMHAAFDRLPAHGVSMRVLAQVSRLCGVDQLHTGTAgLGKLA-- 311 Haloferax volcanii
WP_010870747 237 AGSEYVMIDVVVCGFSAVQSFRE--EDFKFIIHAHRAMHAAMTRSRDFGISMLALAKIYRLLGVDQLHIGTV-VGKMEGG 313 Methanocaldococ...
2CWX_A       244 EGGQYVMIDIVVAGWSALQYMREVTEDLGLAIHAHRAMHAAFTRNPRHGITMLALAKAARMIGVDQIHTGTA-VGKMAGN 322 Pyrococcus hori...

1GEH_A       327 KWDVIQNAR--------------I---------------LReshykpdendvfhleQKFYSIKAAFPTSSGGLHPGNIQP 377 Thermococcus ko...
WP_010868329 322 YEEIKKIND--------------F---------------LL---------------SKWEHIRPVFPVASGGLHPGLMPE 357 Pyrococcus abyssi
WP_010879134 324 KWDTVQNAR--------------IfseveytpdegdafhLS---------------QNFHHIKPAMPVSSGGLHPGNLEP 374 Archaeoglobus f...
WP_011323101 315 NEDTAGINE--------------W---------------LR---------------SDLHGHSDVLPVASGGLHPGIVDQ 350 Natronomonas ph...
WP_004043974 312 NEDTVGINE--------------W---------------LA---------------GDLHGATDVLPVASGGLHPGLLPD 347 Haloferax volcanii
WP_010870747 314 EKEVKAIRDeivydkveadnenkF---------------FN---------------QDWFDIKPVFPVSSGGVHPRLVPK 363 Methanocaldococ...
2CWX_A       323 YEEIKRIND--------------F---------------LL---------------SKWEHIRPVFPVASGGLHPGLMPE 358 Pyrococcus hori...

1GEH_A       378 VIEALGTDIVLQLGGGTLGHPDGPAAGARAVRQAIDAIMQGIPLDEYAKTHKELARALEKW 438 Thermococcus kodakarensis KOD1
WP_010868329 358 LIRLFGKDLVIQAGGGVMGHPDGPRAGAKALRDAIDAAIEGLDLEEKAKSSPELKKALDKW 418 Pyrococcus abyssi
WP_010879134 375 VIDALGKEIVIQVGGGVLGHPMGAKAGAKAVRQALDAIISAIPLEEHAKQHPELQAALEKW 435 Archaeoglobus fulgidus
WP_011323101 351 LLDALGTNVMVQAGGGIHGHPDGTEAGARALRAAVDAYADGESLDSRAESVPALRTALDEW 411 Natronomonas pharaonis
WP_004043974 348 LLDATGTNVCVQLGGGIHGHPDGTRAGAVALRSAIDAYVEGRAITEAAEETPELAVALDKW 408 Haloferax volcanii
WP_010870747 364 IVEILGRDLIIQAGGGVHGHPDGTRAGAKAMRAAIEAIIEGKSLEEKAEEVAELKKALEYW 424 Methanocaldococcus jannaschii
2CWX_A       359 LIRLFGKDLVIQAGGGVMGHPDGPRAGAKALRDAIDAAIEGVDLDEKAKSSPELKKSLREv 419 Pyrococcus horikoshii OT3
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