2QV0


Conserved Protein Domain Family
REC_LytTR_AlgR-like

?
cd17532: REC_LytTR_AlgR-like 
Click on image for an interactive view with Cn3D
phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AlgR
Members of the LytTR/AlgR family of response regulators contain a REC domain and a unique LytTR DNA-binding output domain that lacks the helix-turn-helix motif and consists mostly of beta-strands. Transcriptional regulators with the LytTR-type output domains are involved in biosynthesis of extracellular polysaccharides, fimbriation, expression of exoproteins, including toxins, and quorum sensing. Included in this AlgR-like group of LytTR/AlgR family response regulators are Streptococcus agalactiae sensory transduction protein LytR, Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR, Bacillus subtilis sensory transduction protein LytT, and Escherichia coli transcriptional regulatory protein BtsR, which are members of two-component regulatory systems. LytR and LytT are components of regulatory systems that regulate genes involved in cell wall metabolism. AlgR positively regulates the algD gene, which codes for a GDP-mannose dehydrogenase, a key enzyme in the alginate biosynthesis pathway. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.
Statistics
?
PSSM-Id: 381087
Aligned: 30 rows
Threshold Bit Score: 161.551
Created: 9-Nov-2016
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[ED] [ED] [ED]Click to see conserved feature residue pattern help
Evidence:
  • Comment:signal transduction in two-component systems is mediated by metal ion dependent phosphorelay reactions between protein histidine kinases and phosphoaccepting receiver domains in response regulator proteins
  • Comment:for many receivers, Mg2+ is the preferred metal ion, but other divalent ions such as Mn2+ are also used

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1            ##                                              #                           
2QV0_A        12 VIIVEDEFLAQQELSWLINTHs--qMEIVGSFDDGLDVLKFLQHnkVDAIFLDINipslDGVLLAQNISQfahKPFIVFI 89  Klebsiella pneu...
Q8E217         3 ILILDDEMFARQELSFLVEHSqevdNPEIFQAEDISEAEKILFRqqIDLIFLDISlseeNGFTLANQLSQlahPPLVVFA 82  Streptococcus a...
Q82Z76         3 VLIVDDEPLAREELSYLVSQHp--qVTSVAEADSVAEAMEEMMDqkPDLLFLDIHltdeSGFDLAEKLTHlkkAPYLVFA 80  Enterococcus fa...
1854577        3 ALIIDDEPLARNELTYLLNEIg--gFEEINEAENVKETLEALLInqYDIIFLDVNlmdeNGIELGAKIQKmkePPAIIFA 80  Staphylococcus ...
KIA78967       3 ALIVEDEYLARQELAYLIQEHs--aIEIAASVEDGLEAFKFLQEqaVDVVFLDINipsiDGLLLAKNLHKtskPPRIVFV 80  Chromobacterium...
OAA86457       3 AIIIEDEFLARQELRYFIENYs--sIKIVNEFEDGLDALKFIEEneVDVIFLDINipsiDGVVLAKSVSKfskKPYIVFI 80  Clostridium cos...
GAQ95594       5 AIVVDDEPYAREELLYILSHFd--sCRVIGQAGNAKDCIFLYSKfrPDVVFLDIEmpdmSGIEVARQLAKfdnPPLIVFA 82  Thermodesulfovi...
ADO84256       3 CIIVDDEYPSREELKYFIENFs--sLEIVQEFEDPLEVLKYLQEnsVDIIFLDINmpnlDGMSLGKLISKfnkRPEMVFI 80  Ilyobacter poly...
P94514         4 VLIVDDEMLARDELAYLLKRTn--dEMEINEAENIESAFDQMMDqkPDLLFLDVDlsgeNGFDIAKRLKKmkhPPAIVFA 81  Bacillus subtil...
YP_001089118   3 AIIVEDEFPARKELRYFIENKs--gIEVVSEFTNGIEVLDFIQEnkIDVIFLDINiphlDGMLLAKTLNQfksRPKIVFI 80  Clostridioides ...
Feature 1                                                
2QV0_A        90 TAWKEHAVEAFELEAFDYILKPYqESRIINMLQKLTTAWE 129 Klebsiella pneumoniae
Q8E217        83 TAYDNYAVKAFESNAVDYIMKPFeQQRVDMALSKVKKLSQ 122 Streptococcus agalactiae 2603V/R
Q82Z76        81 TAYDQYALKAFQVNAKDYILKPFeEEKITQVIEKASKEMG 120 Enterococcus faecalis V583
1854577       81 TAHDQYAVQAFELNATDYILKPFgQKRIEQAVNKVRATKA 120 Staphylococcus aureus
KIA78967      81 TAYKEFAVEAFEVEAFDYILKPYnETRIISLLAKLEALEQ 120 Chromobacterium piscinae
OAA86457      81 TAYREHAVEAFEVEAFDYILKPYdESRIRSMLRKLETNYM 120 Clostridium coskatii
GAQ95594      83 TAYDDYAIEAFELGAVDYILKPFeEKRIAKTIMRIENLKR 122 Thermodesulfovibrio aggregans
ADO84256      81 TAYDHYAVDAFDIQAFDYIMKPYsEERIVNTLKRLESRPV 120 Ilyobacter polytropus DSM 2926
P94514        82 TAYDQYALKAFEVDALDYLTKPFdEERIQQTLKKYKKVNR 121 Bacillus subtilis subsp. subtilis str. 168
YP_001089118  81 TAYESYAVDAFSLDVFDYILKPYsEERIISMLNKLEKSEM 120 Clostridioides difficile 630

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap