Conserved Protein Domain Family
ribokinase_group_C

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cd01946: ribokinase_group_C 
Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Statistics
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PSSM-Id: 238921
Aligned: 5 rows
Threshold Bit Score: 497.373
Created: 7-Sep-2004
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
substrateATP binding
Feature 1:substrate binding site [chemical binding site]
Evidence:
  • Comment:based on homology to other members of the family
  • Citation:PMID 9519409

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #                                                  
NP_661869     2 SLLVIGSLAFDdIETPFGRSDNTLGGSSTYIALSASYFTdepIRMVGVVGSDFgkehfdllhaknidtrgiqviedGKTF 81  Chlorobium tepid...
AAP58559      2 SLLVVGSVAFDaVETPFGKIDKMLGGSASHFSISASYFTd--VRIVGVVGGDFtdaeqkvfdshnvetsdlervpdGETF 79  uncultured Acido...
CAE78691      3 EILVVGSLAYDsIETPSGKVDRALGGSANYFSLAASLFSk--VRVVGVVGEDYdqkdydllnnr-gvdlaglskvpGKTF 79  Bdellovibrio bac...
AAR34439      2 GILVVGSVAFDsIETPFGRGEHVLGGSATYFSTSASFFTd--VSLVAVVGEDFpeehvaflrsr-nvdlrglsreqGKTF 78  Geobacter sulfur...
ZP_00309884   2 SLLVVGSVAFDaIETPFGKTDKILGGAATYIGLSSSYFNp-kINLVGVVGSDFpesdikmlqshsinteglqikenEKTF 80  Cytophaga hutchi...
Feature 1                                                                                       
NP_661869    82 RWAGRYHYDMNTRDTLdtqLNVFAEFDPHVPQYYRDSKFVCLGNIdPELQLKVLDQIddp-klVVCDTMNFWIEGkpeel 160 Chlorobium tepid...
AAP58559     80 RWYGRYDYDLNVAHTLdtkLNVFADFKPKLSSQSKSSRLVFLGNIqPDLQREVRQQIpda-elVALDTMNLWIETtresl 158 uncultured Acido...
CAE78691     80 HWAGSYEGDLNEAKTLktdLNVFADFNPQLPEHFKDSSFVFLANIaPELQLQVLEQVksp-kfVGMDTMNFWISIkkdkl 158 Bdellovibrio bac...
AAR34439     79 HWKGKYGYDLNEAQTLethLNVFESFRPCIPDAYRDAEYLFLANIdPELQMEVLNQVehp-rvVACDTMNFWISSkpeal 157 Geobacter sulfur...
ZP_00309884  81 FWSGRYHNDMNTRDTLvteLNVLGTFDPIIPASYQDCEFLMLGNLaPAVQRSVIERLknrpklIVMDTMNFWMDIamddl 160 Cytophaga hutchi...
Feature 1                                                                                 #  #  
NP_661869   161 kkvlarVDVFIVNDSEARLLSGDPNLVKtariIREMGPKTLIIKKGEHGALLFt-dNGIFAAPAFPLesIYDPTGAGDTF 239 Chlorobium tepid...
AAP58559    159 mktiqgVDVVIINDAEARQLTELPNLIKaaraILSWGPRALIVKRGEYGAALFt-nDSYFAIPAYPLesVFDPTGAGDTF 237 uncultured Acido...
CAE78691    159 idvlkkVDLVLINEGEAKMLTGAANAISaaplITAMGPKAVVIKRGEYGFAMYtkdEGYFILPAMPIptVVDPTGAGDTF 238 Bdellovibrio bac...
AAR34439    158 rrvvakVDIFIINEGEARQLTGQANLVKaarqILDMGVKTLIIKRGEYGVLMFs-dSSVFAAPAYPLeeVFDPTGAGDTF 236 Geobacter sulfur...
ZP_00309884 161 kqtlalIDVLSINDEEARQLSGEYSLVKaarkIIAMGPKVLIIKKGEHGALLFn-qDQVFFAPALPLedVFDPTGAGDTF 239 Cytophaga hutchi...
Feature 1                                                 
NP_661869   240 AGGFIGHLARcgnts-eaemrKAVLYGSAMASFCVEQFGPYR 280 Chlorobium tepidum TLS
AAP58559    238 AGGFMGYLSSqptld-eaamrRAMIFGSVMASFNVEEFGTAR 278 uncultured Acidobacteria bacterium
CAE78691    239 AGGFFGYLAAqkevptianlkQACIMGSMMASHTIQDFSVKA 280 Bdellovibrio bacteriovorus HD100
AAR34439    237 AGGFMGYLANtgdis-eaglrQAIIFGSVMASFNVEDFSLNR 277 Geobacter sulfurreducens PCA
ZP_00309884 240 AGGFIGYIAStkdts-fenmkRAIIYGSAMASFCVEKFGTER 280 Cytophaga hutchinsonii

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