3K3S,3LAZ


Conserved Protein Domain Family
SAF_AH_GD

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cd11613: SAF_AH_GD 
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Domains similar to fish antifreeze type III protein
Altronate dehydratase (EC 4.2.1.7) converts D-altronate into 2-dehydro-3-deoxy-D-gluconate and is part of a bacterial pathway for the degradation of D-galacturonate. D-galactarate dehydratase (EC 4.2.1.42) eliminates water from D-galactarate to yield 5-dehydro-4-deoxy-D-glucarate, initializing the degradation of D-galactarate. The function of the SAF domain in these enzymes is not clear. It may participate in dimerization.
Statistics
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PSSM-Id: 212158
Aligned: 405 rows
Threshold Bit Score: 73.6159
Created: 21-Feb-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3K3S_A        23 QYIKIHALDNVAVALADLAEGTEVSvd-nqTVTLRQDVARGHKFALTDIAKGANVIKYGLPIGYALADIAAGEHVHAHNT 101  Shigella flexn...
YP_643322     11 VGRLPGPRDNVAIATRRLEAGTRVRcg-gsSFSLSHAVLEGHRFAVSRIGEGEALLSWGLPFGWALREIRPGEYVCNARI 89   Rubrobacter xy...
ZP_02926534    9 SILRIHPADDLIVALRPLQAGEQVSld-gqSWILRHKVGAKHKFAARDFAKDALVTLYGVTVGRAKVAIAAGELVHTHNL 87   Verrucomicrobi...
YP_002756284   3 RVLQIDSRDNVLIALEDLHQGETVMig-gePVVLPAPVPCKHKFVTENRAKGDPVAMYGVLVGRARQNIARGEVITVRNL 81   Acidobacterium...
YP_003324031   9 IARLPAPNDEAAVAVRDLPPGTQVRhr-dgAFTIRSLVPEGHRFAVRTIRTGQSICSWGWPFGVATRDILPGEHLCSPRV 87   Thermobaculum ...
YP_003384425  23 VAVLPEPGDNAAICSRRLDAGTVVDfa-gtPVTLPHTVLEGHRIVVRPVRTGEALTSWQTPFARALRDLAVGDYVCTPTS 101  Kribbella flav...
YP_003547912   8 LARFPVQGDNAAIALKDLKRGTRIQng-dtEIELQHDILTGHRFAAIDIKSGERITSWNYPFGTAERDIQAGEYLCNRNV 86   Coraliomargari...
CBK21964      21 VAILPKPGDNVAVAINEIPMGSLVElldgnIVSISHTVLEGHRFAVKRIEENDGLYSWGMQFGTALKTIQPGEYIMNERG 100  Blastocystis h...
ZP_07720800    4 KALCLDPADNVGVALTDLKPGDSYAln-gaKGQIISEVSSKHKFALEDLSVGEDILMYGTIVGETTQEIKAGEAVTLANI 82   Algoriphagus s...
ZP_09583205    4 KVLRIHRADNVLIALIDLAKDEVIEfm-deYYALQNDIAAKHKFATTDLAVGDEIIMYGVLVGKATQPILKGELIHTHNI 82   Solitalea cana...
3K3S_A       102 R 102  Shigella flexneri 2a str. 2457T
YP_643322     90 L 90   Rubrobacter xylanophilus DSM 9941
ZP_02926534   88 Q 88   Verrucomicrobium spinosum DSM 4136
YP_002756284  82 S 82   Acidobacterium capsulatum ATCC 51196
YP_003324031  88 L 88   Thermobaculum terrenum ATCC BAA-798
YP_003384425 102 L 102  Kribbella flavida DSM 17836
YP_003547912  87 L 87   Coraliomargarita akajimensis DSM 45221
CBK21964     101 R 101  Blastocystis hominis
ZP_07720800   83 K 83   Algoriphagus sp. PR1
ZP_09583205   83 K 83   Solitalea canadensis DSM 3403
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