Conserved Protein Domain Family
mtaseRsmF_Thermus

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NF041567: mtaseRsmF_Thermus 
16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
Statistics
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PSSM-Id: 469452
Aligned: 10 rows
Threshold Bit Score: 672.233
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_240631264      1 MAELLGAEYPAFRAALASEDRSYGLRTNTLKLSPAQLQELSPWRLEPIPWSPEGFYYPAEARPGPHPYYYAGLYYIQEPS 80  Meiothermus ...
Q5SII2           10 MAELLGEEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRISPWPLRPIPWCQEGFYYPEEARPGPHPFFYAGLYYIQEPS 89  Thermus ther...
5_ncbifamImport   1 MAELLGEEYPAFWKALT-GPRTYGLRTNTLKLSPEDLKALAPWPLRPIPWCPEGFYYPEEARPGPHPFFYAGLYYIQEPS 79 
7_ncbifamImport   1 MAELLGEEFSRFLEALTKGRRTYGLRVNTLKLSPEEFLRISPWPLRPIPWCPEGFYYPEEARPGPHPFFYAGLYYIQEPS 80 
2_ncbifamImport   1 MSDLLDTEFPQFLRALTSDDRSYGLRVNTLKLSPERFQDLSPWPLEPIPWCAEGFYYPPDARPGPHPFFYAGLYYIQEPS 80 
6_ncbifamImport   1 MASLLGPEFPAFLAALTQADRSYGLRVNTLKLSPQAFQQISPWPLEPIPWASEGFYYPSEARPGPHPYFYAGLYYIQEPS 80 
1_ncbifamImport   1 MSDLLGEAFPEFLRALTQADRSYGLRVNTLKLSPEQLRQISPWPLEPIPWSPEGFYYPAEARPGPHPYYYAGLYYIQEPS 80 
4_ncbifamImport   1 MHDLLGEEYPAFLKALTAQDRSYGLRVNTLKLEPRAFQALSPWPLEPIPWCPEGFYYPPEARPGPHPYFYAGLYYIQEPS 80 
WP_036218470      1 MSELLGGEFAEFHRALTSADRSYGLRVNTLKLSPEQFRSVSPWPLEPIPWAPEGFYYPPEARPGPHPFFYAGLYYIQEPS 80  Calidithermu...
3_ncbifamImport   1 MAELLGDEYPDFLRALTEEERSHGLRVNTLKLTPAELRARAPWPLEPIPWSPAGFYYPPEARPGPHPYHYAGLYYIQEPS 80 
WP_240631264     81 AQAVGVLADPQPGERVLDLAAAPGGKTTHLASRMQGQGLLVANEVDRGRMPGLLENLERWGMGVAVVSSPLERLAAQWGA 160 Meiothermus ...
Q5SII2           90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGT 169 Thermus ther...
5_ncbifamImport  80 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLLARMEGKGLLLANEVDGKRVRGLLENVERWGASPLVTQVPPKALLERFAG 159
7_ncbifamImport  81 AQAVGVLLDPRPGERVLDLAAAPGGKTTHLAARMRGEGLLVANEVDGKRLRGLLENVERWGARLSVVQAPPRALAEAWGA 160
2_ncbifamImport  81 AQAVGVLADPRPGERVLDLAAAPGGKTTHLAARMGGQGLLIANEVDSKRTRGLLENVERWGARLAVVGAPVERLAEVWGA 160
6_ncbifamImport  81 AQAVGVLADPQPGERVLDLAAAPGGKTTHLAARMQGQGLLIANEVDPSRLRGLLENVERWGASLAVVSAPLERLAERWGG 160
1_ncbifamImport  81 AQAVGVLADPQPGERVLDLAAAPGGKTTHLAARMQGRGLLISNEIDSKRVRGLLENVERWGANLAVVSAPVEKLAQAWGA 160
4_ncbifamImport  81 AQAVGVLAAPKPGERVLDLAAAPGGKTTHLAARMQGQGLLIANEVDGRRVRGLLENVERWGARLAVVSARVEQLAQAWGG 160
WP_036218470     81 AQAVGALADPQPGERVLDLAAAPGGKTTHLASRMRGEGLLVANEVDGGRMGGLLENVERWGARLAVVSAPVERLAEQWGA 160 Calidithermu...
3_ncbifamImport  81 AQAVGEVLDPRPGERVLDLAAAPGGKTTHLAAKMAGRGLLVANEVDSGRIRGLLDNLERWGSTQAVVQAPVARLAERWGA 160
WP_240631264    161 FFDRVLLDAPCSGEGMFRKDPEVVRHWGPGAPARAARVQRGLLGAAGDLVRPGGILVYSTCTFAPEENEQVIAAFLRGNP 240 Meiothermus ...
Q5SII2          170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 Thermus ther...
5_ncbifamImport 160 YFHRVLLDAPCSGEGMFRKDEEARRHWGPSAPRRMAELQAGLLSLSVRLLAPGGVLVYSTCTFAPEENEGVVARVLKAHP 239
7_ncbifamImport 161 YFHRVLLDAPCSGEGMFRKDPEAARHWGPSAPRRMSEVQKGLLAQAARLVVPGGVLVYSTCTFAPEENEGVVAHFLREHP 240
2_ncbifamImport 161 YFDRVVLDAPCSGEGMFRKEPEAMRHWGPTAPERSARVQRSLIDHAGRLVRPGGVLVYSTCTFAPEENEQVIAHFLSRNP 240
6_ncbifamImport 161 WFDRVVLDAPCSGEGMFRKDPEVVRHWGPGAPARAARVQKGLIQAASRLVRPGGVLVYTTCTFAPEENEQVVAELLR-RG 239
1_ncbifamImport 161 YFDRVVLDAPCSGEGMFRKDPEVVRHWGPGAPSRAARIQKTLLAAAADLVRPGGTLVYSTCTFAPEENEQVIADFLR-TP 239
4_ncbifamImport 161 YFDRVVLDAPCSGEGMFRKDPEAVRHWGPGSPARASRIQRRLILAAAALVRPGGVLVYATCTFAPEENEAVVAALLEAHP 240
WP_036218470    161 YFDRVVLDAPCSGEGMFRKDPDVVRHWGPGAPARSARVQRQLIDHAGAMVRPGGVLVYSTCTFAPEENEQVIAHFLTRNP 240 Calidithermu...
3_ncbifamImport 161 FFDRVLLDAPCSGEGMFRKEPAAAARWGPAAPARAAAVQARLLEAAAALVRPGGVLVYATCTFAPEENEGVVGAFLRTHP 240
WP_240631264    241 GWELENAHLDPSFSPGVPQWGDGNPALSRTARLWPHKLRGEGHFLARLRKTEGLENRPPLERPSPLPREVEALWRAWATE 320 Meiothermus ...
Q5SII2          250 EFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHRLEGEGHFLARFRKEGGAWSTPRLERPSPLSQEALRAFRGFLEE 329 Thermus ther...
5_ncbifamImport 240 ELHLEEACFHPLFAPGVPEWGDGNPELAKTARLWPHRLEGEGHFLARFRKGEGPAGTPPKERLGPLPKELERPFGAFLEA 319
7_ncbifamImport 241 DFHLEDARLHPLFAPGVPDWGDQNPELAKTARLWPHLLEGEGHFLARFRREEGRLASPPKEKVPPLSPGTLRLLRAFLEE 320
2_ncbifamImport 241 EFVLESAQLHPSFAPGVPAWGGGDLELAKTARLWPHRLRGEGHFLAKLRKTDGYEGSPAYERVPPLSKEARMAWGAFAAE 320
6_ncbifamImport 240 GWVLEEARFSPLFAPGVPAWGDGNPALVRTARLWPHRLRGEGHFLALLRKTEDSATSPPLAHPSPLGGEVRALWQAWQAE 319
1_ncbifamImport 240 GWTLEDARISPLFADGVPAWGDGLPALARTARLWPHRLRGEGHFLARLRKIDGAENHPPQARIPPPSREARALWQAWSEE 319
4_ncbifamImport 241 EFEVEDARFHPAFAPGVPAWGGGEVRLERTARLWPHRLRGEGHYLARLRRTDGPEGTPPRVRVPRVDPTAQAEWRAFARR 320
WP_036218470    241 EFELEAAQLHPSFAPGVPAWGDGNPALAKAARLWPHRVQGEGHFLAKLRKVDGYEETPPREKVPPLSRESRQAWQGFAQE 320 Calidithermu...
3_ncbifamImport 241 EFDVEDARLHPSFAPGVPAWGGGEPRLERAARLWPHRLRGEGHFLARLVRREGAAGSPPRFRPPRPDHRALAEWRSWARD 320
WP_240631264    321 HLkTPPEGPIWQRSGHLYLLPQDLPSLSGLKAPAPGLYLGEARTGqhrgsgRFLPAKSLAHALRP----AEVGPVVRLGA 396 Meiothermus ...
Q5SII2          330 AG-LTLEGPVLDRAGHLYLLPEGLPTLLGLKAPAPGLYLGKVQKG------RFLPARALALAFGAtlpwPEGLPRLALTP 402 Thermus ther...
5_ncbifamImport 320 LG-LELEGPFLPREGHLYLPPEELPLLAGLRVPAPGLYLGKVQKG------RFLPAKALALAFGAslpwPH-LPLFSLAP 391
7_ncbifamImport 321 VG-LEVTGPVLDRAGHLYWIPEDLPTLSGLRAPAPGLYLGRVQKG------RFIPAKALAHHLNp---eKVRLPGLDFLP 390
2_ncbifamImport 321 HLkTDLEGEIWERAGHLYLLPEGLPSLSGIRAPAPGLYLGKVQAG------RLLPGKPLAHFLGV----EEVGPCVELAA 390
6_ncbifamImport 320 HLeSPIEGEVLERAGHLYWLPPGLPSLAGLRTPAPGLYLGEARTGqrkgtgRFLPGKPLAHFLKP----SQASPRLLLSP 395
1_ncbifamImport 320 HLqIALEGELLERAGHLYLLPPGLPDLEGLRAPAPGLYLGQARTGhrkdtgRFLPGQPLAHYLTP----GEVNHPLLLPS 395
4_ncbifamImport 321 HLeTLPEGVIWERSGHLYLLPEDLPSLDRIKAPAPGLYLGQAKKG------RFVPAKALAHYLRP----GTAGPTFDLDP 390
WP_036218470    321 HLkVSLEGEIWERAGHLYLLPEGLPSLAGVKAPAPGLYLGKVQAG------RVLPGKALAHHLEP----SQVARAVELAP 390 Calidithermu...
3_ncbifamImport 321 HLkDPPEGALWERSGHLYLLPDGLPDLGRIATPAPGLYLGQARKG------RFVPAAHLAHALPP----GAAGPELALGA 390
WP_240631264    397 EDPRALKFALGEPVEAEGEPG-WALAALQTEVGEFPLGWGKLKGGILRPGKTGL 449 Meiothermus granaticius
Q5SII2          403 EDPRALAFATGEGVAWEGEDHpLALVVLKTAAGEFPLDFGKAKRGVLRPVGVGL 456 Thermus thermophilus HB8
5_ncbifamImport 392 EDPRALRLALGEGVGWEGKDEpLGLIVLETERGRFPLDFGKAKGGVLRPTGLGL 445
7_ncbifamImport 391 EDPRALAFALLEPVPAEAADG-LYLALLRTPVGRFPLGFAKVKKGVARMVRGEL 443
2_ncbifamImport 391 EDPRTLAFAEGNLIECDGSEG-TVWVGVRTQEGSFGLGWGKLKGGILRPGRTGL 443
6_ncbifamImport 396 DDPRALAFAQGQPIPAEGPDG-WWLVGLKTAMGDYSLGWGRLKGGVMRPGKTGL 448
1_ncbifamImport 396 DDPRTLAFALGQPIPAEGTDG-WKLVALQTPVGNFSLGWGRLKAGVLRPSRTGL 448
4_ncbifamImport 391 EDSRALRFAQGEGVEAVGEDG-WYLVTTKG----HALGWGRLKGGVLRPSRATL 439
WP_036218470    391 DDPRALRFVQNNPVELEAEDG-WAVVAVATAVGSFSLGWAKIKGGVARMGRATL 443 Calidithermus chliarophilus
3_ncbifamImport 391 DDPRALAFALGEPVPHPGPGG-WYWVTVEG----FGLGWGKAKGRVLRPAHARL 439
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