2YHY,3EO3,2YHW


Conserved Protein Domain Family
ASKHA_NBD_ROK_GNE

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cd24060: ASKHA_NBD_ROK_GNE 
nucleotide-binding domain (NBD) of bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (GNE) and similar proteins
GNE (EC 3.2.1.183/EC 2.7.1.60), also called UDP-GlcNAc-2-epimerase/ManAc kinase, is a bi-functional enzyme that plays a key role in sialic acid biosynthesis. It regulates and initiates biosynthesis of N-acetylneuraminic acid (NeuAc), a precursor of sialic acids. It plays an essential role in early development and required for normal sialylation in hematopoietic cells. Sialylation is implicated in cell adhesion, signal transduction, tumorigenicity and metastatic behavior of malignant cells. GNE is the only human protein that contains a kinase domain belonging to the ROK (repressor, ORF, kinase) family. Mutations of the GNE protein cause sialurea or autosomal recessive inclusion body myopathy/Nonaka myopathy.
Statistics
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PSSM-Id: 466910
Aligned: 13 rows
Threshold Bit Score: 444.167
Created: 14-Dec-2022
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 1 residue position
Conserved feature residue pattern:DClick to see conserved feature residue pattern help
Evidence:
  • Comment:Asp-517 in Homo sapiens GNE (2YHY) was presumed to be the catalytic residue that acts as a general base. It is also involved in ManNAc coordination.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
2YHY_A        31 SALAVDLGGTNLRVAIVsmkGEIVKKYTQFNpkt-yeERINLILQMCVEAaaeav---klncRILGVGISTGGRVnpREG 106 human
3EO3_A        21 SALAVDLGGTNLRVAIVsmkGEIVKKYTQFNpkt-yeERINLILQMCVEAaaeav---klncRILGVGISTGGRVnpREG 96  human
2YHW_A        31 SALAVDLGGTNLRVAIVsmkGEIVKKYTQFNpkt-yeERINLILQMCVEAaaeav---klncRILGVGISTGGRVnpREG 106 human
Q9Y223       408 SALAVDLGGTNLRVAIVsmkGEIVKKYTQFNpkt-yeERINLILQMCVEAaaeav---klncRILGVGISTGGRVnpREG 483 human
NP_001026603 440 SALAVDLGGTNLRVAIVsmkGEIVKKYTQLNpkt-yeDRLGLILKMCVEAaseav---nlncRILGVGISTGGRVnpREG 515 chicken
NP_001072728 408 SALAVDLGGTNLRIGIVsmtGEIIKKYVQPNpkt-yeDRIELILKMCVEAaseav---klncRILGVGISTGGRVnpREG 483 tropical clawed...
XP_007890073 426 SALAVDLGGTNLRVAIIsmqGDLIKKYIQPNpet-fnERIALIRKMCVDAatesv---nlncRILGVGISTGGRVnpAEG 501 elephant shark
NP_957177    411 SALSVDLGGTNLRVGIVsmkGKVVKKYVQLNpkt-feERIELILTMCKQAmadav---hlncRILGVGVSTGGRVnpQDG 486 zebrafish
XP_014351402 275 SALAVDLGGTNLRVAIVsmkGEIIKLCKQPNpkt-yeARIALILKMCVEAaseav---dmncRILGVGVSTGGRVnpNDG 350 coelacanth
XP_002613236 421 SALAVDLGGTNLRVAIVgqqGEILHKMTEPTpgt-neERMDVLMRLLVEStskav---elncRILGIGISTGGRVnpYDG 496 Florida lancelet
ALR88571     436 SALAVDLGGTNLRVSIVskaGEIMHMMSKPTpsd-ntARMESLLTLLVDAsqiat---klncRVLGVGVSTGGRVnpHEG 511 Saccoglossus ko...
XP_030841747 420 SALAVDMGGTQLRVALIaadGEIKLRRSRPTphttneDRMKALLELLLEAtkesy---alncRVLGVGISTGGRVnsKEG 496 purple sea urchin
WP_071453647   5 WALAVDLGGTHLRVAVVtpqGERLYQEQQATp----rTRQDILTQMWVMLrqgqewatqrggRLGGIGISTGGRVdfGRG 80  Gloeomargarita ...
Feature 1                                         #                                              
2YHY_A       107 IVLHSTKLIqeWNSVDLRTPLSDTlHLPVWVDNDGNCAALAERKFGqgkglENFVTLITGTGIGGGIIHQHELIHGssFC 186 human
3EO3_A        97 IVLHSTKLIqeWNSVDLRTPLSDTlHLPVWVDNDGNCAALAERKFGqgkglENFVTLITGTGIGGGIIHQHELIHGssFC 176 human
2YHW_A       107 IVLHSTKLIqeWNSVDLRTPLSDTlHLPVWVDNDGNCAALAERKFGqgkglENFVTLITGTGIGGGIIHQHELIHGssFC 186 human
Q9Y223       484 IVLHSTKLIqeWNSVDLRTPLSDTlHLPVWVDNDGNCAALAERKFGqgkglENFVTLITGTGIGGGIIHQHELIHGssFC 563 human
NP_001026603 516 IVLHSTKLIqeWSSVDLRTPISDAlHLPVWVDNDGNCAALAERKFGhgkgiENFVTLITGTGIGGGIIHQHELIHGssFC 595 chicken
NP_001072728 484 VVLHSTKLIqeWSSVDLRTPLSDTlHLPVWVDNDGNCAALAERKFGqgkgiEDFVTVITGTGIGGGVIHNHELVHGssFC 563 tropical clawed...
XP_007890073 502 IVLHSTKLIqeWISVDLRTPISDAlHLPVWVDNDGNCAALAEKKYGhgkgvENFVTVITGTGIGGGIIHNSELIHGsmFC 581 elephant shark
NP_957177    487 VVLHSTKLIkeWSSVDIRTPLSSAlHLPVWVDNDGNCAALAERKFGhgkgvENFVTIITGTGIGGGIIQHNELIHGntFC 566 zebrafish
XP_014351402 351 VILHSTKLIqeWTSVDLRTPISDAlHLPVWVDNDGNCATLAERKFGhgrgvENFVTVITGTGIGGGVLHRSELIHGtsFC 430 coelacanth
XP_002613236 497 VVLHSTEILegWNSIDLRTPISSKlHLPVWVDNDGNCAALGEKKFGkglgsEDFITLIVGTGIGGGIFLNNELVHGanFC 576 Florida lancelet
ALR88571     512 LVMHSTKSLegWSAIDLRTPISSAlHLPVWVDNDGNCAALGERKFGhgkgkEDFLAIATGTGIGGGLVLNGRLVHGsnFC 591 Saccoglossus ko...
XP_030841747 497 LVMHSTKAIagWDEIDLRTPIETTlHLPVWVDNDGNCAALGERKFGhgrgvKDFITIATGTGIGGGIVLDKRLIHGtnFC 576 purple sea urchin
WP_071453647  81 EVVDATALLpdWRRVPLRDLTVAHlGLSTWVENDGNCAALGELWFGagqdcDHFLSVVVGTGIGGGVILNRQVLRGagSA 160 Gloeomargarita ...
Feature 1                                                                                        
2YHY_A       187 AAELGHLVVsldGPDCSCGSHGCIEAYASGMALQreakklhdedlllvegmsvpkdeavGALHLIQAAKLgnaKAQSILR 266 human
3EO3_A       177 AAELGHLVVsldGPDCSCGSHGCIEAYASGMALQreakklhdedlllvegmsvpkdeavGALHLIQAAKLgnaKAQSILR 256 human
2YHW_A       187 AAELGHLVVslxGPDCSCGSHGCIEAYASGMALQreakklhdedlllvegmsvpkdeavGALHLIQAAKLgnaKAQSILR 266 human
Q9Y223       564 AAELGHLVVsldGPDCSCGSHGCIEAYASGMALQreakklhdedlllvegmsvpkdeavGALHLIQAAKLgnaKAQSILR 643 human
NP_001026603 596 AAELGHIVVsldGPECLCGSQGCIEAYASGIALQreakklhdedlllvegmsmkneevvSAAHLIQAAKLgnaKAESILR 675 chicken
NP_001072728 564 AGELGHIMVsfdGPDCMCGSRGCVEAYASGIALQreakklhdedmllvegmsvkndesvSAVHLIQAAKFgntKASNILK 643 tropical clawed...
XP_007890073 582 AAELGHIIVsldGPECMCGARGCIEAYASGMGLQreakklhdedllmvegmsikneeavSAVHLIQAAKLgntKAQNVLR 661 elephant shark
NP_957177    567 AAELGHIVVsleGPECMCGGHGCIEAYSSGLALQreakrlhdedlllvegmtlnnkeqvNAIHLINAARLgnsKAETVLH 646 zebrafish
XP_014351402 431 AAEFGHIAVsvdGPECSCGNRGCIEAYASGMALQreakrlndeesllmegmalkneetvSAIDLIVASKFgnlKAEKVLR 510 coelacanth
XP_002613236 577 AAELGHISVcmdGPDCTCGSSGCVESYASGLALQreakklhdadellvpgvhltdgeelTAKHLIQAAQLgnkKAEKVVE 656 Florida lancelet
ALR88571     592 AAELGHIAVsidGPACMCGSSGCVEAYSSGLALMreakklhqagelivdgmkidtneiiSAKHLIQAAKLgnkKAEKIIH 671 Saccoglossus ko...
XP_030841747 577 AAELGHIKVsldGPACQCGSHGCVEAYSSGMALKreamklheagellvdgmivekgeevTAKHLVQAAKTgnqKAKKILD 656 purple sea urchin
WP_071453647 161 AGELGHISVdyqGPMCNCGNWGCVELFASGSGLAnlaqtlweagllqfthkiitsaqeiTAQDVGEAAQLgnpVAQDLIR 240 Gloeomargarita ...
Feature 1                                                                              
2YHY_A       267 TAGTALGLGVVNILHTMNPSLVILSGVLaSHYIHIVKDVIRQQalss-vqdVDVVVSDLvDPALLGAASM 335 human
3EO3_A       257 TAGTALGLGVVNILHTMNPSLVILSGVLaSHYIHIVKDVIRQQalss-vqdVDVVVSDLvDPALLGAASM 325 human
2YHW_A       267 TAGTALGLGVVNILHTMNPSLVILSGVLaSHYIHIVKDVIRQQalss-vqdVDVVVSDLvDPALLGAASM 335 human
Q9Y223       644 TAGTALGLGVVNILHTMNPSLVILSGVLaSHYIHIVKDVIRQQalss-vqdVDVVVSDLvDPALLGAASM 712 human
NP_001026603 676 TAGTALGLGVVNILHTMNPSLVILSGVLaSHYVNAVKDVIHRQalss-vktVDVVVSNLaDPALLGAASL 744 chicken
NP_001072728 644 TAGTALGIGVINILHTINPSLVILSGVLaNQYVNVVKDVIRQRglas-iqnVDVVVSSLsDPALLGAASM 712 tropical clawed frog
XP_007890073 662 TAGTALGIGIVNILHTVNPSLVILSGVLaSTFESMVKDVIAQRalss-tqnVEVLVSDLlEPALLGAASM 730 elephant shark
NP_957177    647 TAGTALGLGIVNILHMINPSLVILSGVLaVHYETPVRQVIGQRallt-aqgTKVMVSDLeDPALLGAASM 715 zebrafish
XP_014351402 511 TAGTAVGLGILNILHILNPSLVILSGVLaSQYESTVKEIISQRalps-aqtVNVVISNLvEPALLGAASM 579 coelacanth
XP_002613236 657 RACEALGSAICTLLHTVNPSHIILCGHLaPHYVDGVREVIQRRalpsaannIQVMVSDLeEPALLGAASI 726 Florida lancelet
ALR88571     672 LGGEALGTAVISILHLLNPTLVVLCGVLaPTYVDIVRETIENKalps-argVKVQVSLLkEPALMGAASL 740 Saccoglossus kowalevskii
XP_030841747 657 TGAQALGTAITSLLHVLNPKLVILCGVLsNVYLEPVREAVKTHslpsavseVEIVSSQLvEPALLGAASL 726 purple sea urchin
WP_071453647 241 RAGRILGTALTSLLHTFNPERVIVGGPVlDLGENYWQPLVATVaera-mvqAPLVRSPLrDAGLLGAATL 309 Gloeomargarita lithophora

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