esv275549
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:complex substitution
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,974
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 120 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 37 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv275549 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 98,153,037 | 98,153,509 | 98,166,781 | 98,167,010 |
| esv275549 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 97,782,349 | 97,782,821 | 97,796,093 | 97,796,322 |
| esv275549 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 97,620,285 | 97,620,757 | 97,634,029 | 97,634,258 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2585436 | complex substitution | SNP array | Other |
| essv2585969 | complex substitution | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| essv2585436 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 98,153,037 | 98,153,509 | 98,166,781 | 98,167,010 |
| essv2585969 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 98,153,037 | 98,153,509 | 98,166,781 | 98,167,010 |
| essv2585436 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 97,782,349 | 97,782,821 | 97,796,093 | 97,796,322 |
| essv2585969 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 97,782,349 | 97,782,821 | 97,796,093 | 97,796,322 |
| essv2585436 | Submitted genomic | NCBI36 (hg18) | NC_000007.12 | Chr7 | 97,620,285 | 97,620,757 | 97,634,029 | 97,634,258 | ||
| essv2585969 | Submitted genomic | NCBI36 (hg18) | NC_000007.12 | Chr7 | 97,620,285 | 97,620,757 | 97,634,029 | 97,634,258 |