(txid69781[Organism:noexp]) AND gds_sra[filter] - GEO DataSets

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Select item 2002485201.

Regulation mechanism of POX08340 and POX01907 in Penicillium oxalicum HP7-1 at the transcriptional level

(Submitter supplied) In order to studing molecular mechanism of Raw Starch Digesting Glucoamylase production in Penicillium oxalicum ,we deleted POX01907 and POX08340 and analyzed the co-expression network of POX08340 and POX01907 at transcriptional level.

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32390
6 Samples

Download data: TXT

Series

Accession:: GSE248520

ID:: 200248520

Select item 2002450462.

Regulation mechanism of POX08340 and POX01907 in Penicillium oxalicum HP7-1 at the transcriptional level

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32390
9 Samples

Download data: TXT

Series

Accession:: GSE245046

ID:: 200245046

Select item 2002611113.

FaiR regulates the development of Penicillium oxalicum fungi and the expression of cellulolytic genes

(Submitter supplied) The goals of this study are to compare different gene expressions for Penicillium oxalicum wild type strain (WT) and FaiR deletion strain (DfaiR) under conditions of 1% bran + 1% microcrystalline cellulose as carbon source. The results of correlation analysis between each sample showed that the gene expression level of DfaiR was significantly different from that of the WT strain. The deletion of DfaiR significantly down-regulates the expression levels of sporulation process genes. more...

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: TXT

Series

Accession:: GSE261111

ID:: 200261111

Select item 2001557904.

Large scale transcriptome analysis was used to identify the genes most related to the transcription of cellulase genes and/or xylanase genes expression

(Submitter supplied) Based on the transcriptome data of deletion mutants of different genes and different culture conditions of Penicillium oxalicum, the correlation of gene transcription levels in the whole genome was calculated to explore the genes most related to the transcription of cellulase gene and/or xylanase gene in Penicillium oxalicum, including transcription factors, sugar transporters and other functional genes.

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL26664 GPL24231 GPL20250
114 Samples

Download data: XLS

Series

Accession:: GSE155790

ID:: 200155790

SRA Run Selector

Select item 2001547115.

Effect of gene POX09752 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) To explore the effect of transcription factor POX09752 on the transcription levels of cellulase-encoding genes and xylanase-encoding genes

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: TXT

Series

Accession:: GSE154711

ID:: 200154711

SRA Run Selector

Select item 2001547046.

Effect of gene POX07071 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) To explore the effect of G-protein POX07071 on the transcription levels of cellulase-encoding genes and xylanase-encoding genes

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
12 Samples

Download data: TXT

Series

Accession:: GSE154704

ID:: 200154704

SRA Run Selector

Select item 2001546427.

Effect of gene POX06509 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) Explore the functions of important transcription factors that regulate the expression of cellulase gene and xylanase gene

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: TXT

Series

Accession:: GSE154642

ID:: 200154642

SRA Run Selector

Select item 2001546418.

Effect of gene POX05503 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) Explore the functions of protein kinase that regulate the expression of cellulase gene and xylanase gene

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: TXT

Series

Accession:: GSE154641

ID:: 200154641

SRA Run Selector

Select item 2001546389.

Effect of gene POX01907 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) Explore the functions of important transcription factors that regulate the expression of amylase genes

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
9 Samples

Download data: TXT

Series

Accession:: GSE154638

ID:: 200154638

SRA Run Selector

Select item 20015463610.

Effect of gene POX00158 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) To explore the effect of phosphokinase POX00158 on the transcription levels of cellulase-encoding genes and xylanase-encoding genes

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26664
6 Samples

Download data: TXT

Series

Accession:: GSE154636

ID:: 200154636

SRA Run Selector

Select item 20016651911.

RNA-seq of mutant delta POX01387after transfer from glucose medium to Avicel medium for 24 hours

(Submitter supplied) To explore the effect of transcription factor POX01387 on transcription levels of plant-biomass-degrading enzyme-encoding genes in Penicillium oxalicum

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: XLS

Series

Accession:: GSE166519

ID:: 200166519

SRA Run Selector

Select item 20015262412.

RNA-seq of mutant delta POX07277 after transfer from glucose medium to Avicel medium for 24 hours

(Submitter supplied) Effect of phospholipase on cellulase production

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: FA, XLS

Series

Accession:: GSE152624

ID:: 200152624

SRA Run Selector

Select item 20015488213.

Effects of transcription factor POX04513 on the transcription of cellulase genes and xylanase genes in Penicillium oxalicum

(Submitter supplied) To investigate the effect of the transcription factor POX04513 in Penicillium oxalicum on the expression levels of cellulase and xylanase genes in solid and liquid fermentation

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
15 Samples

Download data: TXT

Series

Accession:: GSE154882

ID:: 200154882

SRA Run Selector

Select item 20015471014.

Effect of gene POX07948 deletion on gene expression of Penicillium oxalicum

(Submitter supplied) To explore the effect of phosphokinase POX07948 on the transcription levels of cellulase-encoding genes and xylanase-encoding genes

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
6 Samples

Download data: TXT

Series

Accession:: GSE154710

ID:: 200154710

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20020684015.

RNA-seq of mutant delta POX03070 and delta PoxCxrA after transfer from glucose medium to Avicel medium for 24 hours

(Submitter supplied) To explore the effect of POX03070 on transcription levels of plant-biomass-degrading enzyme-encoding genes in Penicillium oxalicum,and the interaction between POX03070 and PoxCxrA in transcriptional level.

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32390
9 Samples

Download data: TXT

Series

Accession:: GSE206840

ID:: 200206840

Select item 20022848316.

The F-box protein Fbx23 regulates the development of Penicillium oxalicum fungi and the expression of cellulolytic genes

(Submitter supplied) The goals of this study are to compare different gene expressions for Penicillium oxalicum wild type strain (WT), Fbx23 deletion strain (Δfbx23), and Fbx23 ecover strain (Refbx23) under conditions of 2% glucose or 1% bran + 1% microcrystalline cellulose as carbon source. The results of correlation analysis between each sample showed that the gene expression level of Δfbx23 was significantly different from that of the WT strain. more...

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
18 Samples

Download data: CSV

Series

Accession:: GSE228483

ID:: 200228483

Select item 20014271517.

Transcriptomic analysis of fungus Penicillium oxalicum 114, laeA deletion strains and histone H2B point mutant strains

(Submitter supplied) RNA-seq was used to compare the responses of laeA deletion strain and histone H2B point mutant strains . The wild-type strain were also studied.

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
12 Samples

Download data: TXT

Series

Accession:: GSE142715

ID:: 200142715

SRA Run Selector

Select item 20021016118.

Effect of deletion of PoxCxrC and overexpression of POX_f08097 in engineering strain Penicillium oxalicum TE4-10 at the transcriptional level

(Submitter supplied) In order to obtain genetically engineering strain of Penicillium oxalicum with high Raw Starch Digesting Glucoamylase production,we deleted PoxCxrC and overexpressed POX_f08097 in Penicillium oxalicum TE4-10 ,and we want to investigating the function of deletion of PoxCxrC and overexpression of POX_f08097 at transcriptional level.

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32390
6 Samples

Download data: TXT

Series

Accession:: GSE210161

ID:: 200210161

PubMed Full text in PMC Similar studies

Select item 20017577119.

Transcription factor CrzA modulate fungal development and cellulolytic gene expression in Penicillium oxalicum

(Submitter supplied) The goals of this study are to compare different gene expressions for Penicillium oxalicum wild type strain (WT), CrzA deletion strain (ΔCrzA) and CrzA recover strain (ReCrzA) in 2% starch as carbon sources. The correlation analysis results between the various samples showed that the gene expression levels of the wild strain and the RecrzA strain were similar, and the gene expression levels between ΔcrzA and the wild strain were significantly different. more...

Organism:: Penicillium oxalicum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24231
9 Samples

Download data: FA, TXT

Series

Accession:: GSE175771

ID:: 200175771

SRA Run Selector

Select item 20017568220.

Transcription factor AmyR and Molecular brake Hat1 modulate amylase gene expression in Penicillium oxalicum

(Submitter supplied) The goals of this study are to compare different gene expressions for Penicillium oxalicum wild type strain (WT), Hat1 deletion strain (ΔHat1) and AmyR deletion strain (ΔAmyR) in 2% starch as carbon sources. The correlation analysis results between the various samples showed that the gene expression levels of the wild strain and the ΔHat1 strain were significantly different, and the gene expression levels between ΔAmyR and the wild strain were also significantly different. more...