GPL19442[Accession] - GEO DataSets

Search results

Items: 1 to 20 of 42

<< First< Prev

Page of 3

Select item 2002171481.

Genomic and Transcriptional Characterisation of Carbapenem and Colistin Resistance Mechanisms in Klebsiella pneumoniae

(Submitter supplied) The transcriptional, epigenomic, and genomic profiles of K. pneumoniae isolates were characterised to identify novel colistin and carbapenem resistance mechanisms. The genomic DNA and total RNA of the isolates were isolated and sequenced on PacBio.

Organism:: Enterobacter bugandensis; Enterobacter cloacae complex sp. R_G8; Enterobacter cloacae; Klebsiella pneumoniae; Acinetobacter baumannii; Enterobacter asburiae

Type:: Expression profiling by high throughput sequencing; Other

12 related Platforms
22 Samples

Download data: CSV, DIFF, GFF, PDF

Series

Accession:: GSE217148

ID:: 200217148

Select item 2001236352.

Transcriptomic analysis of arcA difficient Acinetobacter baumannii

(Submitter supplied) A. baumannii response to arcA disruption

Organism:: Acinetobacter baumannii

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19442
2 Samples

Download data: XLSX

Series

Accession:: GSE123635

ID:: 200123635

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001540703.

Inactivation of AdeABC and AdeIJK efflux pumps elicits specific non-overlapping transcriptional and phenotypic responses in Acinetobacter baumannii

(Submitter supplied) Purpose: In this study, we analyzed the contributions of AdeABC and AdeIJK in antibiotic resistance and growth physiology of the two MDR strains, AYE and AB5075. Methods: To further characterize the functional interactions between AdeABC and AdeIJK, we carried out RNAseq analysis of the exponential AB5075 and its single and double efflux knockout cells. High quality total RNA was further processed by removing 23S and 16S rRNAs using the MicrobExpress bacterial mRNA enrichment kit. more...

Organism:: Acinetobacter baumannii

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19442
8 Samples

Download data: TXT

Series

Accession:: GSE154070

ID:: 200154070

PubMed Similar studies SRA Run Selector

Select item 2001203464.

Transcriptome profiling of wild type and ΔabaI::Km mutant

(Submitter supplied) Transcriptome profiling of quorum sensing regulated genes in Acinetobacter baumannii 863

Organism:: Acinetobacter baumannii

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19442
6 Samples

Download data: TXT

Series

Accession:: GSE120346

ID:: 200120346

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001099515.

Colistin resistant A. baumannii: genomic and transcriptomic traits acquired under colistin therapy

(Submitter supplied) Comparative Genomic and Transcriptomic Characterization of Colistin-Resistant Acinetobacter baumannii

Organism:: Acinetobacter baumannii

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19442
8 Samples

Download data: XLSX

Series

Accession:: GSE109951

ID:: 200109951

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001032446.

The primary transcriptome of Acinetobacter baumannii ATCC 17978

(Submitter supplied) Transcriptomics by RNA-seq provides unparalleled insight into bacterial gene expression networks, enabling a deeper understanding of the regulation of pathogenicity, mechanisms of antimicrobial resistance, metabolism, and other cellular processes. Here we present the transcriptome architecture of Acinetobacter baumannii ATCC 17978, a species emerging as a leading cause of antimicrobial resistant nosocomial infections. more...

Organism:: Acinetobacter baumannii

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL23966 GPL19442
5 Samples

Download data: GR

Series

Accession:: GSE103244

ID:: 200103244

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001005827.

Mucin Acts as a Nutrient Source and a Signal for the Differential Expression of Genes Coding for Cellular Processes and Virulence Factors in Acinetobacter baumannii

(Submitter supplied) The capacity of Acinetobacter baumannii to persist and cause infections depends on its interaction with abiotic and biotic surfaces, including those found on medical devices and host mucosal surfaces. However, the extracellular stimuli affecting these interactions are poorly understood. Based on our previous observations, we hypothesized that mucin, a glycoprotein secreted by lung epithelial cells, particularly during respiratory infections, significantly alters A. more...