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Items: 4

1.

Distribution of elongating and total RNA polymerase II in xrn1 mutants using GRO and RPCC

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array; Genome binding/occupancy profiling by array
Platform:
GPL16503
22 Samples
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Series
Accession:
GSE43605
ID:
200043605
2.

Distribution of elongating RNA polymerase II along the 5'/3' regions in xrn1 mutants

(Submitter supplied) Determination of the 3' or 5' intragenic nascent transcriptional rate. Maintaining the proper mRNA levels is a key aspect in the regulation of gene expression. The balance between mRNA synthesis and decay determines these levels. Using a whole-genome analysis, we demonstrate that most yeast mRNAs are degraded by the 5'-to-3' pathway (the "decaysome"), as proposed previously. Unexpectedly, the level of these mRNAs is highly robust to perturbations in this major pathway, as defects in various decaysome components lead to transcription down-regulation. more...
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL16503
12 Samples
Download data
Series
Accession:
GSE43602
ID:
200043602
3.

Valencia yeast 3' 5' (384)

(Submitter supplied) Nylon macroarray (7 x 11 cm) with 768 positions: 754 single spotted of about 300 bp 3' or 5' ORF end region, plus 12 probes for rRNA controls and 2 empty spots. Protocol: See Rodríguez-Gil et al. (2010), Nucleic Acids Research Vol. 38 No. 14. pp. 4651-4664. PMID 20385590. doi: 10.1093/nar/gkq215.
Organism:
Saccharomyces cerevisiae
3 Series
22 Samples
Download data
Platform
Accession:
GPL16503
ID:
100016503
4.

gDNA Filter6

Organism:
Saccharomyces cerevisiae
Source name:
Wild type cells grown in YPD to exponential phase
Platform:
GPL16503
Series:
GSE43602 GSE43605
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Sample
Accession:
GSM1066117
ID:
301066117
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