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Items: 3

1.

Elucidation of tumor-stromal heterogeneity and the ligand-receptor interactome by single cell transcriptomics in real-world pancreatic cancer biopsies

(Submitter supplied) Through single-cell RNA sequencing (scRNA-seq), we identify substantial transcriptomic evolution of PDOs propagated from the parental tumor, which may alter predicted drug sensitivity. In addition, we performed an integrative analyses of PDAC biopsies and provide an in-depth characterization of the heterogeneity within the tumor microenvironment, including cancer-associated fibroblast (CAF) subclasses, and predicts for a multitude of ligand-receptor interactions, revealing potential targets for immunotherapy approaches.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
17 Samples
Download data: TAR
Series
Accession:
GSE156405
ID:
200156405
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

Peripheral blood mononuclear cell - P1

Organism:
Homo sapiens
Source name:
Peripheral blood
Platform:
GPL18573
Series:
GSE156405
Download data: TAR
Sample
Accession:
GSM4730269
ID:
304730269
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db=gds|term=GSM4730269[Accession]|query=1|qty=2|blobid=MCID_677b38cd0bdf8a6e73ee0f7b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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