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Links from GEO DataSets

Items: 5

1.

Profiling of aggressive vs benign pancreatic infiltrates in the BDC2.5 Tg model of Type I diabetes

(Submitter supplied) This study was performed to understand what controls the aggressivity of the pancreatic infiltrate during type-I diabetes development. We used the BDC2.5 transgenic mouse model. Samples were obtained at the age of onset of insultis. Depending on their genetic background, mice transgenic for the BDC2.5 T cell receptor present very different forms of insulitis. The NOD genetic background leads to a benign insulitis whereas the C57Bl/6-H2g7/g7 leads to an aggressive insulitis. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS828
Platform:
GPL81
24 Samples
Download data
Series
Accession:
GSE1085
ID:
200001085
2.
Full record GDS828

Insulitis: comparison of innocuous and destructive forms

Analysis of CD4+ automimmune T and CD45+ hematopoeitic cells from non-obese diabetic (NOD) and C57BL/6-H-2 g7 transgenics with the BDC2.5 T cell receptor (TCR) from a diabetogenic T cell. BDC2.5 TCR in NOD and in C57BL/6-H-2 g7 results in innocuous and destructive insulitis respectively.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 3 cell type, 2 genotype/variation, 2 strain, 3 tissue sets
Platform:
GPL81
Series:
GSE1085
24 Samples
Download data
3.

Gene expression profiling of NK cells isolated from the pancreas of BDC TCR expressing NOD mice before or after Treg ablation by DTR. Also, NK cells cultured in vitro with activating cytokines IL12 and IL-18 with or without regulatory TGFb.

(Submitter supplied) Following Treg ablation in the BDC/NOD.Foxp3-DTR strain, NK cells produce IFNg and accumulate to higher percentage and number. We explored the signature pathways responsible for this phenomenon using microarray prolifing and comparison to other activation signatures.
Organism:
Mus musculus
Type:
Expression profiling by array
Datasets:
GDS4946 GDS4948
Platform:
GPL6246
41 Samples
Download data: CEL
Series
Accession:
GSE39197
ID:
200039197
4.
Full record GDS4948

Transforming growth factor beta effect on cytokine-activated, NOD-derived, splenic natural killer cells

Analysis of NOD-derived, splenic natural killer (NK) cells cultured with or without cytokines interleukin (IL)-12 + IL-18 in the absence of TGF-β, or with both cytokines in the presence of TGF-β. Results provide insight into the impact of TGF-β on NK cells independent of general activation.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 3 protocol, 2 time sets
Platform:
GPL6246
Series:
GSE39197
9 Samples
Download data: CEL
5.
Full record GDS4946

Regulatory T cell ablation effect on BDC2.5/NOD pancreatic or splenic natural killer cells: time course

Analysis of natural killer (NK) cells isolated from the pancreas or spleen of BDC2.5/NOD.Foxp3DTR animals up to 24 hours after diphtheria toxin (DT) injection to ablate regulatory T (Treg) cells. Results provide insight into molecular mechanisms underlying Treg/NK cross-talk in controlling diabetes.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 genotype/variation, 3 time, 2 tissue sets
Platform:
GPL6246
Series:
GSE39197
32 Samples
Download data: CEL
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