GEO DataSets

(Submitter supplied) Genomic rearrangement, often driven by insertion sequence (IS) elements, is one of the major processes in the evolution of prokaryotes. Sequence analysis of 16S rRNA of Lactobacillus helveticus, an organism that evolved in a dairy environment and Lactobacillus acidiophilus an organism that evolved associated with the gastrointestinal tract (GIT) demonstrated 98.4% identity suggesting that they divergently evolved from a common ancestor. more...

Organism:

Lactobacillus helveticus; Lactobacillus helveticus CNRZ32; Lactobacillus helveticus DPC 4571

Type:

Genome variation profiling by array

Platform:

GPL8703

9 Samples

Download data: TXT

(Submitter supplied) With the aid of a biochip, carrying representative sequences from approximately 2200 sequences from the genome of isolate 9a5c from X. fastidiosa (Xf), microarray-based comparisons have been performed with 8 different Xf isolates obtained from coffee plants.

Organism:

Xylella fastidiosa

Type:

Genome variation profiling by array

Platform:

GPL4683

32 Samples

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(Submitter supplied) L. helveticus is used to modulate cheese flavor and as a starter organism in certain cheese varieties. Our group has compiled a draft (4x) sequence for the 2.4 Mb genome of an industrial strain L. helveticus CNRZ32. The primary aim was to investigate expression of 168 completely sequenced genes during growth in milk and MRS medium using microarrays. Oligonucleotide probes against each of the completely sequenced genes were compiled on maskless photolithography-based DNA microarrays. more...

Organism:

Lactobacillus helveticus; Lactobacillus helveticus CNRZ32

Type:

Expression profiling by array

Platform:

GPL4817

12 Samples

Download data: DATA, PAIR

(Submitter supplied) High-density microarrays based on Maskless Array Synthesizer technology.

Organism:

Lactobacillus helveticus CNRZ32

1 Series

12 Samples

Download data: TXT