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Platform GPL8703 Query DataSets for GPL8703
Status Public on Jun 12, 2009
Title Ocimum OciChip CA010_Teagasc, Lactobacillus helveticus 2K array
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Lactobacillus helveticus DPC 4571
Manufacturer Ocimum Biosolutions, Hyderabad, India
Manufacture protocol 50mer oligonucleotides spotted in duplicates, 2x105k
 
 
Submission date Jun 11, 2009
Last update date Jun 12, 2009
Contact name Pawel Kaleta
E-mail(s) [email protected]
Phone 003532542607
Organization name TEAGASC
Department Biotechnology
Street address Moorepark
City Fermoy
State/province Co Cork
ZIP/Postal code 00000
Country Ireland
 
Samples (9) GSM415891, GSM415892, GSM415893, GSM415894, GSM415895, GSM415896 
Series (1)
GSE16553 Genomes of DPC5364, DPC5365, DPC5352, DPC5367, DPC5360, DPC5394, DPC5607, CNRZ32, DPC5389 vs DPC4571

Data table header descriptions
ID
ORF Gene_ID
GENE_ID
SEQUENCE
DESCRIPTION DESCRIPTION

Data table
ID ORF GENE_ID SEQUENCE DESCRIPTION
lhv_0001 lhv_0001 OBSca009#0001 CTCTTGTTAAGGTTCAGGCATACGCAACTATTGAAAGGGCAGATATAAAC Chromosomal replication initiation protein
lhv_0002 lhv_0002 OBSca009#0002 AACAGATACTGATTTAACATTAACTGGTAGCGATACAGACATTTCCATTG DNA polymerase III Beta chain
lhv_0003 lhv_0003 OBSca009#0003 TTAGGGCAATTCCTTAAAGAAGAAAGCATTATTTCATCAGGTGGACAAGC Hypothetical protein
lhv_0004 lhv_0004 OBSca009#0004 AAAAGTGTGGATAAACCGTGTTGAGCAAGCTAAGTTATCGAAATATGTTG DNA repair and genetic recombination protein
lhv_0005 lhv_0005 OBSca009#0005 GATTGCACCACTTAGTGTGGGAAATTATTGATAACAGTATTGATGAACGC DNA gyrase
lhv_0006 lhv_0006 OBSca009#0006 CATGATGCGTAGTTCTTTCTTGGACTATGCAATGTCAGTTATTGTAGCTC DNA gyrase
lhv_0007 lhv_0007 OBSca009#0007 GGCAACTACAAAGTACGAAGTAACTTACATTATCAAGCCTGATGTTGATG 30s ribosomal protein S6
lhv_0008 lhv_0008 OBSca009#0008 CCGTATCCAAACCAGAAGTTATGACAATAAAGATGGGCAAAGAGTATATG Single-stranded dna-binding protein
lhv_0009 lhv_0009 OBSca009#0009 CATCGATTACGTTGACTACAAGGATGTCGATCTGTTGAAACGTTTTATCT 30s ribosomal protein S18
lhv_0010 lhv_0010 OBSca009#0010 CTGCATAATGGACATCTGATTACCAACATTCGCTATTTAACAGCTAATGC Hypothetical protein
lhv_0012 lhv_0012 OBSca009#0011 CTTTATCTGGTGGAGAGAAACGAAAAGTAGAAATTGCTCGTGCATTATTG Hypothetical membrane protein
lhv_0013 lhv_0013 OBSca009#0012 GGGCAAATACTTGTTGGAGGGTTAATTTCACTTTTTCTAGCATCTGATCG ABC Type multidrug transporter
lhv_0014 lhv_0014 OBSca009#0014 GACCAATGCCCATCCTGCTAACCATTATCTTTTAGGCGATGAAGGCTACC Transposase
lhv_0015 lhv_0015 OBSca009#0016 GCCTATGTAAAAGCAAGTGATGTTGAATTTCACGGTGTTAAACTAACCCC Hypothetical protein
lhv_0016 lhv_0016 OBSca009#0017 CTTTAGTGGGAAGCATTATTGCGATGATTATGAGTCCATTATTTGGCCTG Putative signalling protein
lhv_0017 lhv_0017 OBSca009#0018 TACTAAGGGTAATATGAATACCTTGAAGCGTGTAGAAGCTAACGAAAAGG 50S ribosomal protein L9
lhv_0018 lhv_0018 OBSca009#0019 GACCCTTCAAGATGAACTAAACAAGAGAAATCAGCTAGATGACATTGGTG Replicative DNA helicase
lhv_0019 lhv_0019 OBSca009#0020 GATGATAAGAGAGCAATGACTGATGTTGTTCCGATTTACTTCACGCAATG Putative alkylphosphonate ABC transporter
lhv_0020 lhv_0020 OBSca009#0021 GATCAAACTGCAAAAGCATAAAATCTATGAAGCTGAACTGATTCAACCTG Transposase
lhv_0021 lhv_0021 OBSca009#0022 CGCCGTTTTAACTGATAGCTCAGCTTATTTAACTAAAGAACAACAGGAAA Hypothetical protein

Total number of rows: 2164

Table truncated, full table size 227 Kbytes.




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