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Links from GEO DataSets

Items: 18

1.

Strategies towards improved feed efficiency in pigs comprise molecular shifts in hepatic lipid and carbohydrate metabolism

(Submitter supplied) Individual pigs [(Large White × Landrace) x Hylean Maxgro] divergent in residual feed intake were sampled for hepatic transcriptome profiling at day 140.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
12 Samples
Download data: CEL
Series
Accession:
GSE95223
ID:
200095223
2.

Effects of selection on residual feed intake and diet on gene expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
96 Samples
Download data: TXT
Series
Accession:
GSE84093
ID:
200084093
3.

Effects of selection on residual feed intake and diet on gene expression in pig skeletal muscle

(Submitter supplied) Transcriptional profiling in skeletal muscle of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
48 Samples
Download data: TXT
Series
Accession:
GSE84092
ID:
200084092
4.

Effects of selection on residual feed intake and diet on gene expression in pig liver

(Submitter supplied) Transcriptional profiling in liver of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
48 Samples
Download data: TXT
Series
Accession:
GSE84091
ID:
200084091
5.

Effects of selection on residual feed intake and diet on gene expression in pig tissues

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
144 Samples
Download data: TXT
Series
Accession:
GSE70839
ID:
200070839
6.

Effects of selection on residual feed intake and diet on gene expression in pig perirenal adipose tissue

(Submitter supplied) Transcriptional profiling in peritoneal adipose tissue of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
48 Samples
Download data: TXT
Series
Accession:
GSE70837
ID:
200070837
7.

Effects of selection on residual feed intake and diet on gene expression in pig subcutaneous adipose tissue

(Submitter supplied) Transcriptional profiling in subcutaneous adipose tissue of 48 pigs aged (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
48 Samples
Download data: TXT
Series
Accession:
GSE70836
ID:
200070836
8.

RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high- and low-feed efficient Nordic dairy cattle

(Submitter supplied) The study investigated gene expression patterns in liver tissue to understand the biological functions of genes that are potentially involved in controlling / regulating feed efficiency in Nordic dairy cattle.
Organism:
Bos taurus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19172
38 Samples
Download data: TXT
Series
Accession:
GSE92398
ID:
200092398
9.

Effect of selection on residual feed intake and diet on gene expression in whole blood of pig

(Submitter supplied) Transcriptional profiling in the whole blood of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16524
48 Samples
Download data: TXT
Series
Accession:
GSE70838
ID:
200070838
10.

Transcriptome profiles of pigs divergent in feed efficiency

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
48 Samples
Download data: CEL
Series
Accession:
GSE109335
ID:
200109335
11.

Hypothalamic transcriptome profiles of pigs divergent in feed efficiency

(Submitter supplied) in vivo microarray study of transcriptional changes of the hypothalamus obtained from pigs divergent in feed efficiency.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
12 Samples
Download data: CEL
Series
Accession:
GSE109334
ID:
200109334
12.

Ileal transcriptome profiles of pigs divergent in feed efficiency

(Submitter supplied) in vivo microarray study of transcriptional changes of ileal scratchings (mucosa) obtained from pigs divergent in feed efficiency.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
12 Samples
Download data: CEL
Series
Accession:
GSE109333
ID:
200109333
13.

Jejunal transcriptome profiles of pigs divergent in feed efficiency

(Submitter supplied) in vivo microarray study of transcriptional changes of jejunal scratchings (mucosa) obtained from pigs divergent in feed efficiency.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
12 Samples
Download data: CEL
Series
Accession:
GSE109332
ID:
200109332
14.

Duodenal transcriptome profiles of pigs divergent in feed efficiency

(Submitter supplied) in vivo microarray study of transcriptional changes of duodenum scratchings (mucosa) obtained from pigs divergent in feed efficiency.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL16569
12 Samples
Download data: CEL
Series
Accession:
GSE109331
ID:
200109331
15.

Transcriptome Profiling of the Rumen Epithelial Tissues of Beef Cattle Differing in Residual Feed Intake

(Submitter supplied) We functionally analyzed the rumen epithelial transcriptomes from low- and high- feed efficient beef steers to identify differences that might contribute to variation in feed efficiency.
Organism:
Bos taurus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15749
20 Samples
Download data: TXT
Series
Accession:
GSE76501
ID:
200076501
16.

Expression data from Chicken duodenum

(Submitter supplied) The objective of this study was to decipher the molecular basis of feed efficiency in meat-type chicken using duodenum tissues from a chicken population divergently selected for residual feed intake (RFI). Residual feed intake is the deviation of expected feed intake from actual feed intake. Chickens that consume less feed than expected are efficient (LRFI) and chickens that consume more feed than expected are inefficient (HRFI). more...
Organism:
Gallus gallus
Type:
Expression profiling by array
Platform:
GPL3213
16 Samples
Download data: CEL
Series
Accession:
GSE39824
ID:
200039824
17.

Long-term dietary replacement of fish meal and fish oil in diets for rainbow trout: effects on intestinal and hepatic gene expression

(Submitter supplied) In the context of replacing fish meal and fish oil in feeds for aquaculture, rainbow trout alevins received from first-feeding onwards, one of the three experimental diets: V (100% plant-based), C (mix of FM-FO & plant ingredients) or M (100% FM-FO based). The long term effects of such dietary replacement on the intestinal (mid gut) and hepatic transcriptome were studied in juveniles after a 7-month feeding trial at 7°C.
Organism:
Oncorhynchus mykiss
Type:
Expression profiling by array
Platform:
GPL15840
48 Samples
Download data: TXT
Series
Accession:
GSE84985
ID:
200084985
18.

Adipose tissue nutrigenomic study in Iberian pigs with dietary intervention of oleic acid supplementation

(Submitter supplied) We studied the influence of the oleic acid content of the diet on adipose tissue transcriptome. Iberian pigs were fed a standard (C) or a high oleic sunflower oil enriched (HO) diet. Transcriptome analyses were performed in adipose tissue samples (inner layer) obtained at slaughter (110 kg live weight) employing the Affymetrix porcine GeneChip. Normalized and filtered microarray expression data (background corrected and base-2 logarithmic-transformed) were analyzed through Bayesian inference using the GEAMM v.1.6 program. more...
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL3533
15 Samples
Download data: CEL
Series
Accession:
GSE47941
ID:
200047941
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