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Items: 16

1.

Comparative transcriptome analysis of Brucella suis 1330 wild-type and DregA mutant

(Submitter supplied) Investigation of whole genome gene expression level changes in a B. suis 1330 regA mutant, compared to the wild-type strain. The two-component system RegBA of Brucella suis plays a central role in the control of respiratory systems adapted to oxygen deficiency. The mutant strain is affected in long-term persistence in vitro (this study) and in chronic infection in vivo (Abdou, E et al. 2013, Infect.Immun. more...
Organism:
Brucella suis; Brucella suis 1330
Type:
Expression profiling by array
Platform:
GPL22261
6 Samples
Download data: CALLS, PAIR
Series
Accession:
GSE87538
ID:
200087538
2.

Transcriptome-wide identification of Hfq-associated RNAs in Brucella suis by deep sequencing

(Submitter supplied) We report the identification of new noncoding RNAs in Brucella suis 1330 and that are associated to the chaperone protein Hfq
Organism:
Brucella suis 1330
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20974
2 Samples
Download data: GR
Series
Accession:
GSE73621
ID:
200073621
3.

Global Rsh-dependent transcription profile of Brucella suis during stringent response unravels adaptation to nutrient starvation and cross-talk with other stress responses.

(Submitter supplied) In the intracellular pathogen Brucella spp., the activation of the stringent response, a global regulatory network providing rapid adaptation to a variety of growth-affecting stress conditions such as nutrient deficiency, is essential for replication in the host. A single, bi-functional enzyme Rsh catalyzes synthesis and hydrolysis of the alarmone (p)ppGpp, responsible for differential gene expression under stringent conditions. more...
Organism:
Brucella melitensis; Brucella suis 1330
Type:
Expression profiling by array
Platform:
GPL7612
4 Samples
Download data: TXT
Series
Accession:
GSE44688
ID:
200044688
4.

Illumina HiSeq 2000 (Brucella suis 1330)

Organism:
Brucella suis 1330
1 Series
2 Samples
Download data
Platform
Accession:
GPL20974
ID:
100020974
5.

Brucella suis 1330 DregA study mutant C

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 DregA
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333525
ID:
302333525
6.

Brucella suis 1330 DregA study mutant B

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 DregA
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333524
ID:
302333524
7.

Brucella suis 1330 DregA study mutant A

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 DregA
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333523
ID:
302333523
8.

Brucella suis 1330 DregA study wild-type C

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 wild-type
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333522
ID:
302333522
9.

Brucella suis 1330 DregA study wild-type B

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 wild-type
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333521
ID:
302333521
10.

Brucella suis 1330 DregA study wild-type A

Organism:
Brucella suis 1330
Source name:
Brucella suis 1330 wild-type
Platform:
GPL22261
Series:
GSE87538
Download data: CALLS, PAIR
Sample
Accession:
GSM2333520
ID:
302333520
11.

Flag-tagged Hfq

Organism:
Brucella suis 1330
Source name:
Flag-tagged Hfq
Platform:
GPL20974
Series:
GSE73621
Download data: GR
Sample
Accession:
GSM1899588
ID:
301899588
12.

Negative control

Organism:
Brucella suis 1330
Source name:
Negative control
Platform:
GPL20974
Series:
GSE73621
Download data: GR
Sample
Accession:
GSM1899587
ID:
301899587
13.

WT Rep 4 vs Ph7 Rsh1

Organism:
Brucella suis 1330
Source name:
Brucella liquid culture (minimal medium) (channel 1) Brucella liquid culture (minimal medium) (channel 2)
Platform:
GPL7612
Series:
GSE44688
Download data: TXT
Sample
Accession:
GSM1089008
ID:
301089008
14.

WT Rep 3 vs Ph7 Rsh1

Organism:
Brucella suis 1330
Source name:
Brucella liquid culture (minimal medium) (channel 1) Brucella liquid culture (minimal medium) (channel 2)
Platform:
GPL7612
Series:
GSE44688
Download data: TXT
Sample
Accession:
GSM1089007
ID:
301089007
15.

WT Rep 2 vs Ph7 Rsh1

Organism:
Brucella suis 1330
Source name:
Brucella liquid culture (minimal medium) (channel 1) Brucella liquid culture (minimal medium) (channel 2)
Platform:
GPL7612
Series:
GSE44688
Download data: TXT
Sample
Accession:
GSM1089006
ID:
301089006
16.

WT Rep 1 vs Ph7 Rsh1

Organism:
Brucella suis 1330
Source name:
Brucella liquid culture (minimal medium) (channel 1) Brucella liquid culture (minimal medium) (channel 2)
Platform:
GPL7612
Series:
GSE44688
Download data: TXT
Sample
Accession:
GSM1089005
ID:
301089005
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