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LOC100911055 transforming growth factor beta regulator 1-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911055, updated on 14-Nov-2024

Summary

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Symbol
LOC100911055provided by RGD
Full Name
transforming growth factor beta regulator 1-likeprovided by RGD
Primary source
RGD:6495429
See related
EnsemblRapid:ENSRNOG00000033891 AllianceGenome:RGD:6495429
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
AABR07045058.1
Summary
Orthologous to human TBRG1 (transforming growth factor beta regulator 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See LOC100911055 in Genome Data Viewer
Location:
20q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (32048391..32049859)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (31505701..31507161)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (33180800..33182289)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene vestigial-like family member 2 Neighboring gene uncharacterized LOC134483925 Neighboring gene ROS proto-oncogene 1 , receptor tyrosine kinase Neighboring gene discoidin, CUB and LCCL domain containing 1 Neighboring gene golgi associated PDZ and coiled-coil motif containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in regulation of cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transforming growth factor beta regulator 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    32048391..32049859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039099148.2 → XP_038955076.1  transforming growth factor beta regulator 1-like

    UniProtKB/TrEMBL
    M0RDI3
    Related
    ENSRNOP00000067684.3, ENSRNOT00000045139.7
    Conserved Domains (2) summary
    pfam05964
    Location:182 → 232
    FYRN; F/Y-rich N-terminus
    pfam05965
    Location:238 → 319
    FYRC; F/Y rich C-terminus
Nucleotide Protein Strain
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