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Gm44501 predicted readthrough transcript, 44501 [ Mus musculus (house mouse) ]

Gene ID: 102577428, updated on 9-Dec-2024

Summary

Official Symbol
Gm44501provided by MGI
Official Full Name
predicted readthrough transcript, 44501provided by MGI
Primary source
MGI:MGI:5529083
See related
Ensembl:ENSMUSG00000117190 AllianceGenome:MGI:5529083
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Esp6Esp5; Esp6-esp5
Summary
This locus represents naturally occurring readthrough transcription between the neighboring Esp6 (exocrine gland secreted peptide 6) and Esp5 (exocrine gland secreted peptide 5) genes on chromosome 17. The readthrough transcript encodes a protein that shares sequence identity with the downstream gene product, but is shorter at its N-terminus. [provided by RefSeq, Dec 2013]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Gm44501 in Genome Data Viewer
Location:
17 B2; 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (40872398..40890440)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (40561507..40579549)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29748 Neighboring gene STARR-seq mESC enhancer starr_42545 Neighboring gene predicted gene, 46573 Neighboring gene exocrine gland secreted peptide 6 Neighboring gene STARR-seq mESC enhancer starr_42546 Neighboring gene exocrine gland secreted peptide 5 Neighboring gene exocrine gland secreted peptide 4 Neighboring gene exocrine gland secreted peptide 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
Esp6-Esp5 readthrough
Names
Esp6-Esp5 readthrough transcript

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001287195.1NP_001274124.1  Esp6-Esp5 readthrough precursor

    See identical proteins and their annotated locations for NP_001274124.1

    Status: VALIDATED

    Source sequence(s)
    AB306983
    UniProtKB/TrEMBL
    A8R0T9
    Related
    ENSMUSP00000156402.2, ENSMUST00000233672.2
    Conserved Domains (1) summary
    pfam16590
    Location:2484
    ESP; Exocrine gland-secreting peptide

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    40872398..40890440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)