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LOC120320863 F-box/WD repeat-containing protein 5 [ Drosophila yakuba ]

Gene ID: 120320863, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120320863
Gene description
F-box/WD repeat-containing protein 5
Locus tag
Dyak_GE18949
See related
EnsemblRapid:LOC120320863
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE18949; GE18949-PB
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Genomic context

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See LOC120320863 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 2L NC_052527.2 (13257831..13258661)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 2L NC_052527.1 (13257832..13258662)

Chromosome 2L - NC_052527.2Genomic Context describing neighboring genes Neighboring gene farnesol dehydrogenase Neighboring gene uncharacterized LOC6528060 Neighboring gene F-box and WD repeat domain containing 5 Neighboring gene E3 ubiquitin-protein ligase PPP1R11 Neighboring gene NADH dehydrogenase (ubiquinone) 51 kDa subunit Neighboring gene uncharacterized LOC26535966

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 5
Names
Dyak\GE18949
Dyak\GE18949-PB
dyak_GLEANR_2731

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052527.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    13257831..13258661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039371799.1 → XP_039227733.1  F-box/WD repeat-containing protein 5

    Related
    XP_039227733.1, XM_039371799.1
    Conserved Domains (2) summary
    sd00039
    Location:163 → 201
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:77 → 238
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases