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Oseg5 intraflagellar transport protein Oseg5 [ Chrysoperla carnea ]

Gene ID: 123306214, updated on 23-May-2024

Summary

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Gene symbol
Oseg5
Gene description
intraflagellar transport protein Oseg5
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysoperla carnea
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Neuroptera; Hemerobiiformia; Chrysopidae; Chrysopinae; Chrysoperla
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See Oseg5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current inChrCarn1.1 (GCF_905475395.1) 1 NC_058337.1 (120519482..120526351, complement)

Chromosome 1 - NC_058337.1Genomic Context describing neighboring genes Neighboring gene Rieske iron-sulfur protein Neighboring gene Chronologically inappropriate morphogenesis Neighboring gene cilia- and flagella-associated protein 298 Neighboring gene probable serine/threonine-protein kinase DDB_G0282963

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058337.1 Chromosome 1 Reference inChrCarn1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 80 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysoperla carnea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference inChrCarn1.1

Genomic

  1. NC_058337.1 Reference inChrCarn1.1

    Range
    120519482..120526351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044888139.1 → XP_044744074.1  intraflagellar transport protein 80 homolog

    Conserved Domains (2) summary
    sd00039
    Location:173 → 208
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:91 → 331
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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