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W10D9.3 MKRN2 opposite strand protein-like C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173434, updated on 9-Dec-2024

Summary

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Official Symbol
W10D9.3
Official Full Name
MKRN2 opposite strand protein-like C-terminal domain-containing protein
Primary source
WormBase:WBGene00021131
Locus tag
CELE_W10D9.3
See related
AllianceGenome:WB:WBGene00021131
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human MKRN2OS (MKRN2 opposite strand). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See W10D9.3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (458766..460759, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Secreted protein Neighboring gene Mediator of RNA polymerase II transcription subunit 21 Neighboring gene Nuclear transcription factor Y subunit nfyb-1 Neighboring gene ncRNA Neighboring gene Mitochondrial import receptor subunit TOM22 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein interaction mapping in C. elegans using proteins involved in vulval development. Walhout AJ, et al. Science, 2000 Jan 7. PMID 10615043
  2. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
MKRN2 opposite strand protein-like C-terminal domain-containing protein
NP_001303800.1
  • Confirmed by transcript evidence
NP_001364715.1
  • Confirmed by transcript evidence
NP_001382729.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    458766..460759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001377685.1 → NP_001364715.1  MKRN2 opposite strand protein-like C-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    C0Z1Y1
    Conserved Domains (1) summary
    pfam16044
    Location:25 → 197
    DUF4796; Domain of unknown function (DUF4796)

  2. NM_001395802.1 → NP_001382729.1  MKRN2 opposite strand protein-like C-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8D9I6V4

  3. NM_001316871.1 → NP_001303800.1  MKRN2 opposite strand protein-like C-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0M7RDW8
    Conserved Domains (1) summary
    pfam16044
    Location:10 → 70
    DUF4796; Domain of unknown function (DUF4796)
Nucleotide Protein
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