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F13H10.5 Choline-specific glycerophosphodiester phosphodiesterase [ Caenorhabditis elegans ]

Gene ID: 184442, updated on 14-Nov-2024

Summary

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Official Symbol
F13H10.5
Official Full Name
Choline-specific glycerophosphodiester phosphodiesterase
Primary source
WormBase:WBGene00008776
Locus tag
CELE_F13H10.5
See related
AllianceGenome:WB:WBGene00008776
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be active in I band and striated muscle dense body. Orthologous to human ENPP6 (ectonucleotide pyrophosphatase/phosphodiesterase 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F13H10.5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
6
Sequence:
Chromosome: IV; NC_003282.8 (10990999..10994165)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Choline-specific glycerophosphodiester phosphodiesterase
NP_502049.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10990999..10994165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069648.5 → NP_502049.2  Choline-specific glycerophosphodiester phosphodiesterase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502049.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45359
    Conserved Domains (2) summary
    pfam01663
    Location:26 → 335
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:24 → 392
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
Nucleotide Protein
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