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scl-27 SCP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 191204, updated on 9-Dec-2024

Summary

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Official Symbol
scl-27
Official Full Name
SCP domain-containing protein
Primary source
WormBase:WBGene00022638
Locus tag
CELE_ZK6.3
See related
AllianceGenome:WB:WBGene00022638
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See scl-27 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (400021..401602)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear Hormone Receptor family Neighboring gene Nuclear Hormone Receptor family Neighboring gene Serpentine Receptor, class H Neighboring gene Nuclear Hormone Receptor family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SCP domain-containing protein
NP_503189.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    400021..401602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070788.4 → NP_503189.2  SCP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503189.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61870
    Conserved Domains (1) summary
    cd05380
    Location:27 → 164
    CAP_euk; Eukaryotic CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins
Nucleotide Protein
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