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CG30271 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 246518, updated on 4-Jan-2025

Summary

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Official Symbol
CG30271provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0050271
Locus tag
Dmel_CG30271
See related
AllianceGenome:FB:FBgn0050271
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT17081; CG13528; Dmel\CG30271
Summary
Is expressed in embryonic head sensory system and larval labral sensory complex. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG30271 in Genome Data Viewer
Location:
59B2-59B2; 2-101 cM
Exon count:
10
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22816474..22822111)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18703979..18709634)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cyclin B Neighboring gene stall Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Major Facilitator Superfamily Transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Stall encodes an ADAMTS metalloprotease and interacts genetically with Delta in Drosophila ovarian follicle formation. Ozdowski EF, et al. Genetics, 2009 Nov. PMID 19752215, Free PMC Article
  2. Drosophila genome-wide obesity screen reveals hedgehog as a determinant of brown versus white adipose cell fate. Pospisilik JA, et al. Cell, 2010 Jan 8. PMID 20074523
  3. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
  4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  5. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG30271-PF
CG30271-PG
CG30271-PH
CG30271-PI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22816474..22822111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202057.3 → NP_001188986.2  uncharacterized protein Dmel_CG30271, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188986.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8DYM8, Q8T3R0
    Conserved Domains (3) summary
    cd00204
    Location:100 → 206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:100 → 197
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:100 → 129
    ANK; ANK repeat [structural motif]

  2. NM_166561.5 → NP_726250.3  uncharacterized protein Dmel_CG30271, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726250.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8DYM8, Q8T3R0
    Conserved Domains (3) summary
    cd00204
    Location:100 → 206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:100 → 197
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:100 → 129
    ANK; ANK repeat [structural motif]

  3. NM_001299816.2 → NP_001286745.1  uncharacterized protein Dmel_CG30271, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286745.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0AVU7, G2J618
    Conserved Domains (3) summary
    cd00204
    Location:79 → 185
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:79 → 176
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:79 → 108
    ANK; ANK repeat [structural motif]

  4. NM_166560.4 → NP_726249.2  uncharacterized protein Dmel_CG30271, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726249.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MME0, Q8T3R0
    Conserved Domains (4) summary
    cd00204
    Location:86 → 192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:86 → 183
    Ank_2; Ankyrin repeats (3 copies)
    pfam14153
    Location:376 → 468
    Spore_coat_CotO; Spore coat protein CotO
    sd00045
    Location:86 → 115
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8DYM8 A8DYM8
G2J618 G2J618
Q8IHB2 Q8IHB2
Q8MME0 Q8MME0
Q8T3R0 Q8T3R0

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