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vid21 NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539114, updated on 18-Sep-2024

Summary

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Official Symbol
vid21
Official Full Name
NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1
Primary source
PomBase:SPCC1795.08c
Locus tag
SPOM_SPCC1795.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See vid21 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003421.2 (980971..984908)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein SVP26 Neighboring gene yapsin Yps1 Neighboring gene mitochondrial 37S ribosomal protein uS13m Neighboring gene P-factor pheromone Map2 Neighboring gene uridylate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The NuA4 acetyltransferase and histone H4 acetylation promote replication recovery after topoisomerase I-poisoning. Noguchi C, et al. Epigenetics Chromatin, 2019 Apr 16. PMID 30992049, Free PMC Article
  2. The double-bromodomain proteins Bdf1 and Bdf2 modulate chromatin structure to regulate S-phase stress response in Schizosaccharomyces pombe. Garabedian MV, et al. Genetics, 2012 Feb. PMID 22095079, Free PMC Article
  3. Chaperone-mediated ordered assembly of the SAGA and NuA4 transcription co-activator complexes in yeast. Elías-Villalobos A, et al. Nat Commun, 2019 Nov 20. PMID 31748520, Free PMC Article
  4. Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex. Helmlinger D, et al. EMBO J, 2011 Jun 3. PMID 21642955, Free PMC Article
  5. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Shevchenko A, et al. Genome Biol, 2008. PMID 19040720, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA binding ISM
Inferred from Sequence Model
more info
  
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in DNA repair-dependent chromatin remodeling IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of NuA4 histone acetyltransferase complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    980971..984908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023028.3 → NP_588036.2  NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588036.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59773
    Conserved Domains (1) summary
    smart00573
    Location:476 → 548
    HSA; domain in helicases and associated with SANT domains
Nucleotide Protein
Heading Accession and Version

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