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gcv1 glycine decarboxylase T subunit gcv1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543195, updated on 18-Sep-2024

Summary

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Official Symbol
gcv1
Official Full Name
glycine decarboxylase T subunit gcv1
Primary source
PomBase:SPAC31G5.14
Locus tag
SPOM_SPAC31G5.14
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
n313
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Genomic context

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See gcv1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (3012456..3014213)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FAM32A family protein Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphatidylserine decarboxylase Psd3 Neighboring gene dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables aminomethyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transaminase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in glycine decarboxylation via glycine cleavage system ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of glycine cleavage complex ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrial matrix IC
Inferred by Curator
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
glycine decarboxylase T subunit gcv1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3012456..3014213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019441.3 → NP_594015.1  glycine decarboxylase T subunit gcv1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594015.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14110, Q92364
    Conserved Domains (3) summary
    PLN02319
    Location:17 → 387
    PLN02319; aminomethyltransferase
    pfam01571
    Location:28 → 277
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:287 → 378
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
Nucleotide Protein
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