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CG3071 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31213, updated on 9-Dec-2024

Summary

Official Symbol
CG3071provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0023527
Locus tag
Dmel_CG3071
See related
AllianceGenome:FB:FBgn0023527
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
3071; Dmel\CG3071; EG:25E8.3
Summary
Predicted to enable snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and positive regulation of transcription by RNA polymerase I. Predicted to be part of t-UTP complex. Predicted to be active in nucleolus. Is expressed in organism. Orthologous to human UTP15 (UTP15 small subunit processome component). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See CG3071 in Genome Data Viewer
Location:
2F2-2F2; 1-0.9 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2262837..2264825)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2156870..2158858)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tempura Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45480 Neighboring gene Grp170 co-chaperone

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables snoRNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription by RNA polymerase I IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of transcription by RNA polymerase I ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in rRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of t-UTP complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG3071-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    2262837..2264825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130637.4NP_569993.1  uncharacterized protein Dmel_CG3071 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_569993.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O46069, Q9W4Z9
    Related
    FBpp0070382
    Conserved Domains (4) summary
    COG2319
    Location:26283
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:89318
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam09384
    Location:352494
    UTP15_C; UTP15 C terminal
    sd00039
    Location:87121
    7WD40; WD40 repeat [structural motif]