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CG32971 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 318271, updated on 4-Jan-2025

Summary

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Official Symbol
CG32971provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0052971
Locus tag
Dmel_CG32971
See related
AllianceGenome:FB:FBgn0052971
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG32971
Summary
Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Orthologous to human MED22 (mediator complex subunit 22). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG32971 in Genome Data Viewer
Location:
35A3-35A3; 2-50 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14274821..14278002)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14274821..14278002)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44216 Neighboring gene long non-coding RNA:CR44729 Neighboring gene wing blister Neighboring gene long non-coding RNA:CR43639 Neighboring gene long non-coding RNA:CR43640

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Burst of young retrogenes and independent retrogene formation in mammals. Pan D, et al. PLoS One, 2009. PMID 19325906, Free PMC Article
  2. Single-cell RNA sequencing identifies eggplant as a regulator of germ cell development in Drosophila. Sun Z, et al. EMBO Rep, 2023 Oct 9. PMID 37603128, Free PMC Article
  3. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Zhang YE, et al. Genome Res, 2010 Nov. PMID 20798392, Free PMC Article
  4. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Zhang YE, et al. Bioinformatics, 2011 Jul 1. PMID 21551137, Free PMC Article
  5. Reproductive status alters transcriptomic response to infection in female Drosophila melanogaster. Short SM, et al. G3 (Bethesda), 2013 May 20. PMID 23550122, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG32971-PA
CG32971-PB
CG32971-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    14274821..14278002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144351.3 → NP_001137823.1  uncharacterized protein Dmel_CG32971, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137823.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86BK9
    Conserved Domains (1) summary
    pfam06179
    Location:15 → 117
    Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

  2. NM_001144352.3 → NP_001137824.1  uncharacterized protein Dmel_CG32971, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137824.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86BK9
    Conserved Domains (1) summary
    pfam06179
    Location:15 → 117
    Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

  3. NM_176038.3 → NP_788052.1  uncharacterized protein Dmel_CG32971, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788052.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86BK9
    Related
    FBpp0080194
    Conserved Domains (1) summary
    pfam06179
    Location:15 → 117
    Med22; Surfeit locus protein 5 subunit 22 of Mediator complex
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q86BK9 Q86BK9

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