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CG15208 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32022, updated on 9-Dec-2024

Summary

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Official Symbol
CG15208provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030247
Locus tag
Dmel_CG15208
See related
AllianceGenome:FB:FBgn0030247
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.64; Dmel\CG15208; lincRNA.977
Summary
Predicted to be involved in cytoskeleton organization. Human ortholog(s) of this gene implicated in axial spondylometaphyseal dysplasia. Orthologous to human CFAP410 (cilia and flagella associated protein 410). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG15208 in Genome Data Viewer
Location:
9F8-9F8; 1-33 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10899965..10901811)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10793998..10795844)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44524 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene vermilion

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identical functional organization of nonpolytene and polytene chromosomes in Drosophila melanogaster. Vatolina TY, et al. PLoS One, 2011. PMID 22022482, Free PMC Article
  2. Associations between Variation in X Chromosome Male Reproductive Genes and Sperm Competitive Ability in Drosophila melanogaster. Greenspan L, et al. Int J Evol Biol, 2011. PMID 21716718, Free PMC Article
  3. Natural genetic variation in male reproductive genes contributes to nontransitivity of sperm competitive ability in Drosophila melanogaster. Zhang R, et al. Mol Ecol, 2013 Mar. PMID 23171073
  4. Characteristics of molecular-genetic organization of intercalary heterochromatin band 10A1-2 in X chromosome of Drosophila melanogaster. Babenko VN, et al. Dokl Biochem Biophys, 2009 Jan-Feb. PMID 19341102
  5. Sex-specific role of Drosophila melanogaster HP1 in regulating chromatin structure and gene transcription. Liu LP, et al. Nat Genet, 2005 Dec. PMID 16258543

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15208-PA
CG15208-PB
CG15208-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    10899965..10901811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298170.1 → NP_001285099.1  uncharacterized protein Dmel_CG15208, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285099.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VZ54
    Conserved Domains (2) summary
    sd00035
    Location:44 → 65
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:42 → 83
    LRR_4; Leucine Rich repeats (2 copies)

  2. NM_001298171.1 → NP_001285100.1  uncharacterized protein Dmel_CG15208, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285100.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VZ54
    Conserved Domains (2) summary
    sd00035
    Location:44 → 65
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:42 → 83
    LRR_4; Leucine Rich repeats (2 copies)

  3. NM_132436.3 → NP_572664.1  uncharacterized protein Dmel_CG15208, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572664.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VZ54
    Related
    FBpp0073239
    Conserved Domains (2) summary
    sd00035
    Location:44 → 65
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:42 → 83
    LRR_4; Leucine Rich repeats (2 copies)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VZ54 Q9VZ54

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