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CG7102 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34079, updated on 9-Dec-2024

Summary

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Official Symbol
CG7102provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031961
Locus tag
Dmel_CG7102
See related
AllianceGenome:FB:FBgn0031961
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG17973; Dmel\CG7102
Summary
Predicted to be involved in spliceosomal snRNP assembly. Predicted to be part of catalytic step 2 spliceosome. Orthologous to human BTBD19 (BTB domain containing 19). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG7102 in Genome Data Viewer
Location:
28D2-28D2; 2-29 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7883282..7887513, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7883282..7887513, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene transfer RNA:Glycine-GCC 1-3 Neighboring gene spatzle 3 Neighboring gene uncharacterized protein Neighboring gene Small ribonucleoprotein particle protein SmE Neighboring gene Serpin 28Da Neighboring gene Serpin 28Db

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bmmp influences wing morphology by regulating anterior-posterior and proximal-distal axes development. Zou YL, et al. Insect Sci, 2022 Dec. PMID 34986276
  2. Experimental selection for Drosophila survival in extremely low O(2) environment. Zhou D, et al. PLoS One, 2007 May 30. PMID 17534440, Free PMC Article
  3. The Neurexin/N-Ethylmaleimide-sensitive Factor (NSF) Interaction Regulates Short Term Synaptic Depression. Li T, et al. J Biol Chem, 2015 Jul 17. PMID 25953899, Free PMC Article
  4. Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster. Bogaerts-Márquez M, et al. Mol Ecol, 2021 Feb. PMID 33350518, Free PMC Article
  5. Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates. Olson JM, et al. G3 (Bethesda), 2019 Nov 5. PMID 31690598, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in spliceosomal snRNP assembly ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG7102-PA
CG7102-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    7883282..7887513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298800.1 → NP_001285729.1  uncharacterized protein Dmel_CG7102, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285729.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960Q2, Q9VLV6
    Conserved Domains (4) summary
    smart00225
    Location:21 → 131
    BTB; Broad-Complex, Tramtrack and Bric a brac
    smart00875
    Location:143 → 255
    BACK; BTB And C-terminal Kelch
    smart00584
    Location:303 → 477
    TLDc; domain in TBC and LysM domain containing proteins
    pfam00651
    Location:10 → 128
    BTB; BTB/POZ domain

  2. NM_175980.2 → NP_787994.1  uncharacterized protein Dmel_CG7102, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_787994.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960Q2, Q9VLV6
    Related
    FBpp0079181
    Conserved Domains (4) summary
    smart00225
    Location:21 → 131
    BTB; Broad-Complex, Tramtrack and Bric a brac
    smart00875
    Location:143 → 255
    BACK; BTB And C-terminal Kelch
    smart00584
    Location:303 → 477
    TLDc; domain in TBC and LysM domain containing proteins
    pfam00651
    Location:10 → 128
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MSF4 Q8MSF4
Q9VLV6 Q9VLV6

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