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CG4409 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36840, updated on 9-Dec-2024

Summary

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Official Symbol
CG4409provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034128
Locus tag
Dmel_CG4409
See related
AllianceGenome:FB:FBgn0034128
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4409
Summary
Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG4409 in Genome Data Viewer
Location:
53C4-53C4; 2-80 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16443211..16444845)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12330716..12332350)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene jetboil Neighboring gene uncharacterized protein Neighboring gene Poly(ADP-ribose) polymerase 16 Neighboring gene Chemosensory protein B 53a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The paracentric inversion In(2Rh)PL alters the centromeric organization of chromosome 2 in Drosophila melanogaster. Chlamydas S, et al. Chromosome Res, 2009. PMID 19105035
  2. Drosophila soluble guanylyl cyclase mutants exhibit increased foraging locomotion: behavioral and genomic investigations. Riedl CA, et al. Behav Genet, 2005 May. PMID 15864439
  3. A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi. Fisher WW, et al. Genetics, 2023 Apr 6. PMID 36652461, Free PMC Article
  4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4409-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    16443211..16444845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001103867.3 → NP_001097337.1  uncharacterized protein Dmel_CG4409 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097337.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZAG3, A8E6M4
    Conserved Domains (1) summary
    pfam06757
    Location:81 → 264
    Ins_allergen_rp; Insect allergen related repeat, nitrile-specifier detoxification
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1ZAG3 A1ZAG3

Gene LinkOut

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