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Dyro Dpt-YFP repressor by overexpression [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39271, updated on 4-Jan-2025

Summary

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Official Symbol
Dyroprovided by FlyBase
Official Full Name
Dpt-YFP repressor by overexpressionprovided by FlyBase
Primary source
FLYBASE:FBgn0036152
Locus tag
Dmel_CG6175
See related
AllianceGenome:FB:FBgn0036152
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0257455.23; CG6175; Dmel\CG6175
Summary
Located in nucleus. Is expressed in several structures, including clypeo-labral primordium; embryonic epipharynx; embryonic hindgut; embryonic hypopharynx; and somatic trunk mesoderm derivative. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See Dyro in Genome Data Viewer
Location:
68C1-68C2; 3-36 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11287936..11295919, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11281036..11289019, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44720 Neighboring gene long non-coding RNA:CR45404 Neighboring gene long non-coding RNA:CR44361 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and Analysis of a Gene with Potential to Repress the IMD Pathway in Drosophila melanogaster. Kano N, et al. Zoolog Sci, 2019 Oct. PMID 33319966
  2. High rate of recent transposable element-induced adaptation in Drosophila melanogaster. González J, et al. PLoS Biol, 2008 Oct 21. PMID 18942889, Free PMC Article
  3. Identification of evolutionarily conserved regulators of muscle mitochondrial network organization. Katti P, et al. Nat Commun, 2022 Nov 4. PMID 36333356, Free PMC Article
  4. Genetic architecture of olfactory behavior in Drosophila melanogaster: differences and similarities across development. Lavagnino NJ, et al. Behav Genet, 2013 Jul. PMID 23563598, Free PMC Article
  5. Identification of novel genes that modify phenotypes induced by Alzheimer's beta-amyloid overexpression in Drosophila. Cao W, et al. Genetics, 2008 Mar. PMID 18245849, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Dpt-YFP repressor by overexpression
Names
CG6175-PB
CG6175-PC
CG6175-PD
Dyro-PB
Dyro-PC
Dyro-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    11287936..11295919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001274778.1 → NP_001261707.1  Dpt-YFP repressor by overexpression, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261707.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VTH5, R4SGI7
    Conserved Domains (1) summary
    pfam10545
    Location:64 → 147
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

  2. NM_001274779.1 → NP_001261708.1  Dpt-YFP repressor by overexpression, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261708.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PC68, R4SGI7
    Conserved Domains (1) summary
    pfam10545
    Location:64 → 147
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

  3. NM_140200.2 → NP_648457.1  Dpt-YFP repressor by overexpression, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648457.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VTH5, R4SGI7
    Related
    FBpp0075913
    Conserved Domains (1) summary
    pfam10545
    Location:64 → 147
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PC68 M9PC68
Q8MS46 Q8MS46
Q9VTH5 Q9VTH5

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