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WDR81 WD repeat domain 81 [ Gallus gallus (chicken) ]

Gene ID: 417560, updated on 17-Aug-2024

Summary

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Symbol
WDR81provided by CGNC
Full Name
WD repeat domain 81provided by CGNC
Primary source
CGNC:2148
See related
Ensembl:ENSGALG00010029384
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See WDR81 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (5867517..5880483)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (5604236..5617155)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene apoptosis-inducing factor 3-like Neighboring gene TLC domain containing 2 Neighboring gene microRNA 22 Neighboring gene serpin family F member 2 Neighboring gene serpin family F member 1 Neighboring gene SET and MYND domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol 3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aggrephagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 81

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5867517..5880483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004946539.4 → XP_004946596.2  WD repeat-containing protein 81 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AI00
    Related
    ENSGALP00010043762.1, ENSGALT00010071071.1
    Conserved Domains (3) summary
    cd06071
    Location:346 → 585
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1646 → 1689
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1635 → 1935
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_046902610.1 → XP_046758566.1  WD repeat-containing protein 81 isoform X5

  3. XM_004946538.5 → XP_004946595.2  WD repeat-containing protein 81 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ANI3
    Related
    ENSGALP00010043761.1, ENSGALT00010071070.1
    Conserved Domains (3) summary
    cd06071
    Location:355 → 594
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1655 → 1698
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1644 → 1944
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_040650391.2 → XP_040506325.1  WD repeat-containing protein 81 isoform X2

    UniProtKB/TrEMBL
    A0A8V1ANI3
    Conserved Domains (3) summary
    cd06071
    Location:355 → 594
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1655 → 1698
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1644 → 1944
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_004946540.4 → XP_004946597.2  WD repeat-containing protein 81 isoform X5

    Conserved Domains (3) summary
    cd06071
    Location:322 → 561
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1622 → 1665
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1611 → 1911
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_415806.8 → XP_415806.4  WD repeat-containing protein 81 isoform X4

    UniProtKB/TrEMBL
    A0A8V1ACP1
    Related
    ENSGALP00010043760.1, ENSGALT00010071069.1
    Conserved Domains (3) summary
    cd06071
    Location:332 → 571
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1632 → 1675
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1621 → 1921
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5604236..5617155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687189.1 → XP_040543123.1  WD repeat-containing protein 81 isoform X3

    Conserved Domains (3) summary
    cd06071
    Location:346 → 585
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1646 → 1689
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1635 → 1935
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_040687187.2 → XP_040543121.1  WD repeat-containing protein 81 isoform X1

    Conserved Domains (3) summary
    cd06071
    Location:355 → 594
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1655 → 1698
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1644 → 1944
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_040687188.2 → XP_040543122.1  WD repeat-containing protein 81 isoform X2

    Conserved Domains (3) summary
    cd06071
    Location:355 → 594
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1655 → 1698
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1644 → 1944
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_040687191.2 → XP_040543125.1  WD repeat-containing protein 81 isoform X5

    Conserved Domains (3) summary
    cd06071
    Location:322 → 561
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1622 → 1665
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1611 → 1911
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_040687190.2 → XP_040543124.1  WD repeat-containing protein 81 isoform X4

    Conserved Domains (3) summary
    cd06071
    Location:332 → 571
    Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
    sd00039
    Location:1632 → 1675
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:1621 → 1921
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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