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BCAT1 branched chain amino acid transaminase 1 [ Gallus gallus (chicken) ]

Gene ID: 418193, updated on 3-Dec-2024

Summary

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Symbol
BCAT1provided by CGNC
Full Name
branched chain amino acid transaminase 1provided by CGNC
Primary source
CGNC:9949
See related
Ensembl:ENSGALG00010015306
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See BCAT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (65418640..65483244)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (65740269..65804611)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101748166 Neighboring gene golgi transport 1B Neighboring gene E3 ubiquitin-protein ligase Topors-like Neighboring gene SRY-box 5 Neighboring gene uncharacterized LOC121108363

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables branched-chain-amino-acid transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-valine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
branched-chain-amino-acid aminotransferase, cytosolic
Names
branched chain amino-acid transaminase 1, cytosolic
branched chain aminotransferase 1, cytosolic
XP_040511959.1
XP_040518319.1
XP_040518320.1
XP_046760573.1
XP_046760576.1
XP_046765344.1
XP_416424.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    65418640..65483244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_416424.7 → XP_416424.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

    UniProtKB/TrEMBL
    A0A8V0YYN7
    Related
    ENSGALP00010021462.1, ENSGALT00010036840.1
    Conserved Domains (1) summary
    PRK13357
    Location:33 → 385
    PRK13357; branched-chain amino acid aminotransferase; Provisional

  2. XM_046904620.1 → XP_046760576.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X3

    UniProtKB/TrEMBL
    A0A8V0YYP2

  3. XM_046904617.1 → XP_046760573.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X4

    UniProtKB/TrEMBL
    A0A8V0YRW7, A0A8V0YYP2
    Related
    ENSGALP00010021449.1, ENSGALT00010036816.1

  4. XM_040656025.2 → XP_040511959.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYN7
    Conserved Domains (1) summary
    PRK13357
    Location:54 → 406
    PRK13357; branched-chain amino acid aminotransferase; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    65740269..65804611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040662386.2 → XP_040518320.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

    UniProtKB/TrEMBL
    A0A8V0YYN7
    Conserved Domains (1) summary
    PRK13357
    Location:33 → 385
    PRK13357; branched-chain amino acid aminotransferase; Provisional

  2. XM_046909388.1 → XP_046765344.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X3

    UniProtKB/TrEMBL
    A0A8V0YYP2

  3. XM_040662385.2 → XP_040518319.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYN7
    Conserved Domains (1) summary
    PRK13357
    Location:54 → 406
    PRK13357; branched-chain amino acid aminotransferase; Provisional
Nucleotide Protein
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