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STMN4 stathmin 4 [ Gallus gallus (chicken) ]

Gene ID: 422010, updated on 17-Aug-2024

Summary

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Symbol
STMN4provided by CGNC
Full Name
stathmin 4provided by CGNC
Primary source
CGNC:12435
See related
Ensembl:ENSGALG00010010517
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See STMN4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (105160758..105167588)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (104924523..104931353)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene dynein regulatory complex subunit 1 Neighboring gene tripartite motif containing 35 Neighboring gene angiopoietin-related protein 7-like Neighboring gene proopiomelanocortin Neighboring gene EFR3 homolog B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stathmin-4
Names
stathmin-like 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    105160758..105167588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004935870.5 → XP_004935927.3  stathmin-4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y105
    Related
    ENSGALP00010014244.1, ENSGALT00010025088.1
    Conserved Domains (1) summary
    pfam00836
    Location:49 → 170
    Stathmin; Stathmin family

  2. XM_420017.8 → XP_420017.5  stathmin-4 isoform X3

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

  3. XM_004935871.5 → XP_004935928.3  stathmin-4 isoform X2

    Conserved Domains (1) summary
    pfam00836
    Location:48 → 169
    Stathmin; Stathmin family

  4. XM_004935868.5 → XP_004935925.3  stathmin-4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y785
    Related
    ENSGALP00010014246.1, ENSGALT00010025092.1
    Conserved Domains (1) summary
    pfam00836
    Location:48 → 183
    Stathmin; Stathmin family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    104924523..104931353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668395.2 → XP_040524329.1  stathmin-4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y105
    Conserved Domains (1) summary
    pfam00836
    Location:49 → 170
    Stathmin; Stathmin family

  2. XM_040668397.2 → XP_040524331.1  stathmin-4 isoform X3

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

  3. XM_040668396.2 → XP_040524330.1  stathmin-4 isoform X2

    Conserved Domains (1) summary
    pfam00836
    Location:48 → 169
    Stathmin; Stathmin family

  4. XM_040668398.2 → XP_040524332.1  stathmin-4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y785
    Conserved Domains (1) summary
    pfam00836
    Location:48 → 183
    Stathmin; Stathmin family
Nucleotide Protein Strain
Heading Accession and Version

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