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GRAMD4 GRAM domain containing 4 [ Gallus gallus (chicken) ]

Gene ID: 425953, updated on 3-Dec-2024

Summary

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Symbol
GRAMD4provided by CGNC
Full Name
GRAM domain containing 4provided by CGNC
Primary source
CGNC:52622
See related
Ensembl:ENSGALG00010008745
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See GRAMD4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (16121734..16198685)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (16258893..16335872)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1 Neighboring gene histone cluster 1, H2B-V-like (similar to human histone cluster 1, class H2B genes) Neighboring gene uncharacterized LOC121108891 Neighboring gene uncharacterized LOC121108893 Neighboring gene uncharacterized LOC121109179

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of toll-like receptor 9 signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GRAM domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16121734..16198685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040657095.2 → XP_040513029.1  GRAM domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:100 → 249
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:120 → 182
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:503 → 608
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:329 → 409
    PRT_C; Plant phosphoribosyltransferase C-terminal

  2. XM_040657125.2 → XP_040513059.1  GRAM domain-containing protein 4 isoform X8

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Related
    ENSGALP00010011992.1, ENSGALT00010020822.1
    Conserved Domains (4) summary
    COG4372
    Location:100 → 249
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:120 → 182
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:485 → 590
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:329 → 409
    PRT_C; Plant phosphoribosyltransferase C-terminal

  3. XM_040657079.2 → XP_040513013.1  GRAM domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ39, A0A8V0Y3E6
    Related
    ENSGALP00010011981.1, ENSGALT00010020788.1
    Conserved Domains (4) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:505 → 610
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:331 → 411
    PRT_C; Plant phosphoribosyltransferase C-terminal

  4. XM_040657105.2 → XP_040513039.1  GRAM domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (3) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:499 → 604
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

  5. XM_015275805.4 → XP_015131291.1  GRAM domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Related
    ENSGALP00010011986.1, ENSGALT00010020805.1
    Conserved Domains (3) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:487 → 592
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

  6. XM_046943856.1 → XP_046799812.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39

  7. XM_040657135.2 → XP_040513069.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:76 → 225
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:96 → 158
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:479 → 584
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:305 → 385
    PRT_C; Plant phosphoribosyltransferase C-terminal

  8. XM_046943861.1 → XP_046799817.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39

  9. XM_046943847.1 → XP_046799803.1  GRAM domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A8V0XZ39

  10. XM_046943862.1 → XP_046799818.1  GRAM domain-containing protein 4 isoform X10

    UniProtKB/TrEMBL
    A0A8V0XZ39

  11. XM_040657086.2 → XP_040513020.1  GRAM domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Related
    ENSGALP00010011964.1, ENSGALT00010020742.1
    Conserved Domains (4) summary
    COG4372
    Location:101 → 250
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:121 → 183
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:504 → 609
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:330 → 410
    PRT_C; Plant phosphoribosyltransferase C-terminal

  12. XM_046943851.1 → XP_046799807.1  GRAM domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A8V0XZ39, A0A8V0Y0X9
    Related
    ENSGALP00010011965.1, ENSGALT00010020747.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16258893..16335872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040659132.2 → XP_040515066.1  GRAM domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:100 → 249
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:120 → 182
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:503 → 608
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:329 → 409
    PRT_C; Plant phosphoribosyltransferase C-terminal

  2. XM_040659135.2 → XP_040515069.1  GRAM domain-containing protein 4 isoform X8

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:100 → 249
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:120 → 182
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:485 → 590
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:329 → 409
    PRT_C; Plant phosphoribosyltransferase C-terminal

  3. XM_040659130.2 → XP_040515064.1  GRAM domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XZ39, A0A8V0Y3E6
    Conserved Domains (4) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:505 → 610
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:331 → 411
    PRT_C; Plant phosphoribosyltransferase C-terminal

  4. XM_040659133.2 → XP_040515067.1  GRAM domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (3) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:499 → 604
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

  5. XM_040659134.2 → XP_040515068.1  GRAM domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (3) summary
    COG4372
    Location:102 → 251
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:122 → 184
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:487 → 592
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

  6. XM_046908714.1 → XP_046764670.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39

  7. XM_040659136.2 → XP_040515070.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:76 → 225
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:96 → 158
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:479 → 584
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:305 → 385
    PRT_C; Plant phosphoribosyltransferase C-terminal

  8. XM_046908715.1 → XP_046764671.1  GRAM domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0XZ39

  9. XM_046908711.1 → XP_046764667.1  GRAM domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A8V0XZ39

  10. XM_046908716.1 → XP_046764672.1  GRAM domain-containing protein 4 isoform X10

    UniProtKB/TrEMBL
    A0A8V0XZ39

  11. XM_040659131.2 → XP_040515065.1  GRAM domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XZ39
    Conserved Domains (4) summary
    COG4372
    Location:101 → 250
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK09510
    Location:121 → 183
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd13221
    Location:504 → 609
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam08372
    Location:330 → 410
    PRT_C; Plant phosphoribosyltransferase C-terminal

  12. XM_046908712.1 → XP_046764668.1  GRAM domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A8V0XZ39, A0A8V0Y0X9
Nucleotide Protein
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