U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNCAIP synuclein alpha interacting protein [ Gallus gallus (chicken) ]

Gene ID: 426796, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Symbol
SNCAIPprovided by CGNC
Full Name
synuclein alpha interacting proteinprovided by CGNC
Primary source
CGNC:3969
See related
Ensembl:ENSGALG00010001252
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SNCAIP in Genome Data Viewer
Location:
chromosome: Z
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (85095021..85171210)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (85095021..85171210)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 475 Neighboring gene uncharacterized LOC101748608 Neighboring gene uncharacterized LOC121108293 Neighboring gene sorting nexin 2 Neighboring gene uncharacterized LOC121108294

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
synphilin-1
Names
synuclein, alpha interacting protein (synphilin)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    85095021..85171210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040655838.2 → XP_040511772.1  synphilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X1S5, A0A8V0X4T2
    Related
    ENSGALP00010001446.1, ENSGALT00010002900.1
    Conserved Domains (3) summary
    COG0666
    Location:324 → 505
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]
    pfam16700
    Location:507 → 550
    SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

  2. XM_040655839.2 → XP_040511773.1  synphilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4T2
    Conserved Domains (3) summary
    COG0666
    Location:324 → 505
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]
    pfam16700
    Location:507 → 550
    SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

  3. XM_424409.8 → XP_424409.4  synphilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X1S5, A0A8V0X4T2
    Conserved Domains (3) summary
    COG0666
    Location:324 → 505
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]
    pfam16700
    Location:507 → 550
    SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

  4. XM_004949702.5 → XP_004949759.2  synphilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4T2
    Related
    ENSGALP00010001445.1, ENSGALT00010002899.1
    Conserved Domains (3) summary
    COG0666
    Location:324 → 505
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]
    pfam16700
    Location:507 → 550
    SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    85095021..85171210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046937258.1 → XP_046793214.1  synphilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X1S5, A0A8V0X4T2

  2. XM_046937260.1 → XP_046793216.1  synphilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4T2

  3. XM_046937257.1 → XP_046793213.1  synphilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X1S5, A0A8V0X4T2

  4. XM_046937259.1 → XP_046793215.1  synphilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4T2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials