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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_033934.1 RefSeqGene
- Range
-
5022..31279
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001287754.2 → NP_001274683.1 TRAF3-interacting JNK-activating modulator isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks several exons, uses an alternate 5'-terminal exon, initiates translation at a downstream start codon, and its 3'-terminal exon extends past a splice site that is used in variant 1. The encoded isoform (2) has a shorter N-terminus and a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC110302, BQ277340, BX648450, CB053101
- Consensus CDS
-
CCDS73023.1
- UniProtKB/TrEMBL
-
B1AJU2
- Related
- ENSP00000355990.1, ENST00000367023.5
- Conserved Domains (1) summary
-
- COG4372
Location:3 → 142
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001320143.2 → NP_001307072.1 TRAF3-interacting JNK-activating modulator isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 and 4 both encode the same isoform (1).
- Source sequence(s)
-
AK122792, AK125601, AL022398
- Consensus CDS
-
CCDS1490.2
- UniProtKB/Swiss-Prot
- A1L464, A6NIU9, Q2YDB5, Q4VY06, Q7Z706, Q9Y228
- UniProtKB/TrEMBL
-
B3KWQ9
- Related
- ENSP00000355991.1, ENST00000367024.5
- Conserved Domains (1) summary
-
- COG1196
Location:201 → 517
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001320144.2 → NP_001307073.1 TRAF3-interacting JNK-activating modulator isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (4) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AL049667, AL558384
- Consensus CDS
-
CCDS81422.1
- UniProtKB/TrEMBL
-
B3KWQ9
- Related
- ENSP00000355993.3, ENST00000367026.7
- Conserved Domains (1) summary
-
- COG1196
Location:181 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_025228.4 → NP_079504.2 TRAF3-interacting JNK-activating modulator isoform 1
See identical proteins and their annotated locations for NP_079504.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1 and 4 both encode the same isoform (1).
- Source sequence(s)
-
AK312755, AL558384, BX648450
- Consensus CDS
-
CCDS1490.2
- UniProtKB/Swiss-Prot
- A1L464, A6NIU9, Q2YDB5, Q4VY06, Q7Z706, Q9Y228
- UniProtKB/TrEMBL
-
B3KWQ9
- Related
- ENSP00000355992.3, ENST00000367025.8
- Conserved Domains (1) summary
-
- COG1196
Location:201 → 517
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
RNA
-
NR_109871.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal exon and its 3'-terminal exon extends past a splice site that is used in variant 1. This variant is represented as non-coding because the use of the 5'-most [supported/expected] translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK312755, AL558384, BC110302, BX648450, CB053101
- Related
-
ENST00000478359.5