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rps15ae ribosomal protein S15A E [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829064, updated on 18-Sep-2024

Summary

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Official Symbol
rps15ae
Official Full Name
ribosomal protein S15A E
Primary source
TAIR:AT4G29430
Locus tag
AT4G29430
See related
Araport:AT4G29430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17A13.250; F17A13_250; ribosomal protein S15A E
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Genomic context

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See rps15ae in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (14472303..14473621)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene F-box/RNI-like superfamily protein Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene Leucine-rich repeat protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts. Adams KL, et al. Plant Cell, 2002 Apr. PMID 11971146, Free PMC Article
  2. Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Chang IF, et al. Plant Physiol, 2005 Mar. PMID 15734919, Free PMC Article
  3. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
  4. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  5. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_119088.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosolic ribosome HDA PubMed 
part_of cytosolic small ribosomal subunit HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
ribosomal protein S15A E
NP_194672.1
  • ribosomal protein S15A E (rps15ae); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, cytosolic small ribosomal subunit, cytosolic ribosome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A B (TAIR:AT2G19720.1); Has 3554 Blast hits to 3554 proteins in 1296 species: Archae - 277; Bacteria - 1753; Metazoa - 425; Fungi - 219; Plants - 281; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14472303..14473621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119088.4 → NP_194672.1  ribosomal protein S15A E [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194672.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M0E0
    UniProtKB/TrEMBL
    A0A178V1W4, A0A5S9XX05
    Conserved Domains (1) summary
    PLN00146
    Location:1 → 129
    PLN00146; 40S ribosomal protein S15a; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M0E0.1

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